G1994786


Basic Information

Item Value
gene id G1994786
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 9447593 ~ 9448494 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2283141
gatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctggaagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaagacgttatgtttggcgtcaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccataacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaattgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataacccaagcgacttacagctgtaatcacagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacggccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaatacagttttatat

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2283141 True 902 TUCP 0.41 1 9447593 9448494

Neighbor

gene id symbol gene type direction distance location
gtf2a2 gtf2a2 coding downstream 53179 9391961 ~ 9394414 (-)
otud7a LOC106591491 coding downstream 62602 9258976 ~ 9384991 (-)
LOC110516734 LOC107593117 coding downstream 339344 9090166 ~ 9108249 (-)
LOC118944560 LOC106587999 coding downstream 374251 9043417 ~ 9073342 (-)
LOC110500985 LOC106595573 coding downstream 411207 9025778 ~ 9036386 (-)
LOC110506256 LOC106561895 coding upstream 672556 10121050 ~ 10126999 (-)
fhl5 LOC106561894 coding upstream 718615 10167109 ~ 10184060 (-)
fut9a LOC106561893 coding upstream 765040 10213534 ~ 10225704 (-)
manea LOC106561892 coding upstream 779850 10228344 ~ 10238666 (-)
syt14a syt14 coding upstream 858803 10307297 ~ 10440791 (-)
G1994750 NA non-coding downstream 61753 9385475 ~ 9385840 (-)
G1994733 NA non-coding downstream 113255 9333198 ~ 9334338 (-)
G1994721 NA non-coding downstream 157289 9289895 ~ 9290304 (-)
G1994715 NA non-coding downstream 162304 9284734 ~ 9285289 (-)
G1994792 NA non-coding upstream 14423 9462917 ~ 9463612 (-)
G1994799 NA non-coding upstream 23574 9472068 ~ 9472383 (-)
G1994800 NA non-coding upstream 24595 9473089 ~ 9473369 (-)
G1994801 NA non-coding upstream 25125 9473619 ~ 9474052 (-)
G1994802 NA non-coding upstream 28102 9476596 ~ 9476816 (-)
G1994674 NA other downstream 266888 9177038 ~ 9180705 (-)
LOC110527031 LOC106587988 other downstream 698849 8564300 ~ 8805872 (-)
LOC118944463 LOC106562776 other downstream 1341611 8096974 ~ 8105982 (-)
LOC110515105 LOC106593850 other downstream 1574577 7863456 ~ 7873075 (-)
G1994812 NA other upstream 52222 9500716 ~ 9501653 (-)
G1996632 NA other upstream 1473522 10922016 ~ 10924533 (-)
G1996949 NA other upstream 1969605 11418099 ~ 11418335 (-)
G1999856 NA other upstream 3888841 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 4072192 13520686 ~ 13521520 (-)

Expression


Co-expression Network