Gene
RNA
| Item | Value |
|---|---|
| gene id | G1994894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 9598635 ~ 9602550 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2283282 | False | 276 | lncRNA | 0.35 | 2 | 9598635 | 9600205 |
| TU2283283 | True | 270 | lncRNA | 0.36 | 2 | 9598635 | 9602550 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526863 | LOC106562818 | coding | upstream | 55362 | 9540286 ~ 9543273 (+) |
| klf13 | LOC105021104 | coding | upstream | 364632 | 9173028 ~ 9234003 (+) |
| LOC118936595 | LOC106609700 | coding | upstream | 583148 | 8982115 ~ 9015487 (+) |
| LOC118944396 | idh3a | coding | upstream | 617012 | 8964942 ~ 8981623 (+) |
| LOC118944518 | LOC106609706 | coding | upstream | 705475 | 8880465 ~ 8893160 (+) |
| si:ch211-266g18.10 | LOC106561896 | coding | downstream | 104904 | 9707454 ~ 9812098 (+) |
| LOC110506241 | LOC106561900 | coding | downstream | 243377 | 9845927 ~ 9918295 (+) |
| LOC110506240 | NA | coding | downstream | 342259 | 9944809 ~ 9965961 (+) |
| gnmt | gnmt | coding | downstream | 666401 | 10268951 ~ 10282107 (+) |
| daam2 | daam2 | coding | downstream | 1412449 | 11014999 ~ 11241714 (+) |
| G1994851 | NA | non-coding | upstream | 36220 | 9560723 ~ 9566154 (+) |
| G1994848 | NA | non-coding | upstream | 38912 | 9558110 ~ 9559723 (+) |
| G1994827 | NA | non-coding | upstream | 73266 | 9524967 ~ 9525369 (+) |
| G1994815 | NA | non-coding | upstream | 90061 | 9505775 ~ 9508574 (+) |
| G1994816 | NA | non-coding | upstream | 92187 | 9505835 ~ 9506448 (+) |
| G1994896 | NA | non-coding | downstream | 251 | 9602801 ~ 9603033 (+) |
| G1994906 | NA | non-coding | downstream | 12350 | 9614900 ~ 9616129 (+) |
| G1994917 | NA | non-coding | downstream | 23400 | 9625950 ~ 9626258 (+) |
| G1994919 | NA | non-coding | downstream | 24439 | 9626989 ~ 9627839 (+) |
| G1994941 | NA | non-coding | downstream | 43380 | 9645930 ~ 9650781 (+) |
| G1994757 | LOC106613263 | other | upstream | 207702 | 9390568 ~ 9390933 (+) |
| G1993783 | NA | other | upstream | 900512 | 8697174 ~ 8698123 (+) |
| G1993771 | herc1 | other | upstream | 930368 | 8666601 ~ 8668267 (+) |
| LOC110512379 | LOC106587994 | other | upstream | 1047268 | 8537913 ~ 8553492 (+) |
| G1998628 | NA | other | downstream | 3619487 | 13222037 ~ 13222681 (+) |
| G2002614 | NA | other | downstream | 6087218 | 15689768 ~ 15696280 (+) |
| LOC110506284 | LOC106561914 | other | downstream | 6192582 | 15734525 ~ 15800073 (+) |
| G2002823 | NA | other | downstream | 6469437 | 16071987 ~ 16074044 (+) |
| fshb | LOC100136594 | other | downstream | 7009935 | 16609650 ~ 16614319 (+) |
