G1995464


Basic Information

Item Value
gene id G1995464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10357978 ~ 10358753 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2283951
CCATGGACTTAACAGTGTTCCAAAACATTTTGtaatttgtgctacaggatgaacatttctgtttgaaaaagttagcctttgctttcctaactgactgtgtacattggttcctaacttccctggaaagttgcatatcgcaggggctattcgatgctaatgcaatacgccacaggatgtttttgtgctggtcaagggcagtcaagtctggagtgaaccaagggctatatctgttcttggttctaattttttgaatggggcatgcttatttaagatggagaggaaagcacttttaaagaataaccagtcatcctctactgacgggatgatgtcaatatccttccaggatacctgggccaggtcgattagaaaggcctgctcgctgaagtgttttagggagcgtttgacagtgatgaggggtggtcgtttgaccgcggacccattacagacgcaggcaatgaggcagtgatcgctgagatcctggttgaagacatcagaggtgtatttagagggcaggttggtcaggatgatatctatgagggtgcccgtgtttacggatttagggttgtacctggtagattCCTctataatttgtgtgagattgagggcatcaagcttagattgtaggatggccggggtgttaagcatatcccagtatTGGTCACCTGTCCTCTAAATTCACCTCTGATGTCttagtacaaactctgaagataaaagGGTTGCAaacaattcacatatggtgtccagggcacagctggggcctGAGGGAGGTCTAAAat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2283951 True 776 lncRNA 0.45 1 10357978 10358753

Neighbor

gene id symbol gene type direction distance location
gnmt gnmt coding upstream 75871 10268951 ~ 10282107 (+)
LOC110506240 NA coding upstream 392017 9944809 ~ 9965961 (+)
LOC110506241 LOC106561900 coding upstream 439683 9845927 ~ 9918295 (+)
si:ch211-266g18.10 LOC106561896 coding upstream 545880 9707454 ~ 9812098 (+)
LOC110526863 LOC106562818 coding upstream 814705 9540286 ~ 9543273 (+)
daam2 daam2 coding downstream 656246 11014999 ~ 11241714 (+)
spdya spdya coding downstream 2479535 12838288 ~ 12845477 (+)
wdr43 LOC106561875 coding downstream 2504236 12862989 ~ 12899263 (+)
LOC110515264 LOC106583873 coding downstream 3189178 13547931 ~ 13554393 (+)
LOC110506268 LOC106562017 coding downstream 3209619 13568372 ~ 13718686 (+)
G1995463 NA non-coding upstream 184 10357587 ~ 10357794 (+)
G1995462 NA non-coding upstream 790 10356959 ~ 10357188 (+)
G1995459 LOC106581475 non-coding upstream 4727 10353010 ~ 10353251 (+)
G1995457 NA non-coding upstream 8229 10349510 ~ 10349749 (+)
G1995453 syt14 non-coding upstream 13887 10343777 ~ 10344091 (+)
G1995626 NA non-coding downstream 223762 10582515 ~ 10582807 (+)
G1995628 NA non-coding downstream 225572 10584325 ~ 10585374 (+)
G1995630 NA non-coding downstream 238292 10597045 ~ 10597260 (+)
G1995631 NA non-coding downstream 239870 10598623 ~ 10598831 (+)
G1995633 NA non-coding downstream 241592 10600345 ~ 10600597 (+)
G1994851 NA other upstream 791824 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 967045 9390568 ~ 9390933 (+)
G1993783 NA other upstream 1659855 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 1689711 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 1806611 8537913 ~ 8553492 (+)
G1998628 NA other downstream 2863284 13222037 ~ 13222681 (+)
G2002614 NA other downstream 5331015 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 5436379 15734525 ~ 15800073 (+)
G2002823 NA other downstream 5713234 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 6253732 16609650 ~ 16614319 (+)

Expression


Co-expression Network