G1995644


Basic Information

Item Value
gene id G1995644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10614040 ~ 10614431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2284140
ctcctagctccttcacagccatataaggagtcattggcatgaggcggtttcaaaaaatgtggcacttcctgatttgatttttatctgggtttcgcctgtaacatcagttctgtggcactcacagacaatatctttgcagttttggaaacgtcagagtgttttctttccaaagctgtcaattatatgcatagtcgagcatcttttcgtgacaaaatatcttgtttaaaacgggaacgtttttcatccaaaaattaaaagagcgccccctatatcctgGGAACATTGAAGAACTGTGAATATTGAATcagcagctttcatatgttctgagcaaggaacttaaatgttagcttttttacatggcacataatgcacttttactttcttctccaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2284140 True 392 lncRNA 0.39 1 10614040 10614431

Neighbor

gene id symbol gene type direction distance location
gnmt gnmt coding upstream 331933 10268951 ~ 10282107 (+)
LOC110506240 NA coding upstream 648079 9944809 ~ 9965961 (+)
LOC110506241 LOC106561900 coding upstream 695745 9845927 ~ 9918295 (+)
si:ch211-266g18.10 LOC106561896 coding upstream 801942 9707454 ~ 9812098 (+)
LOC110526863 LOC106562818 coding upstream 1070767 9540286 ~ 9543273 (+)
daam2 daam2 coding downstream 400568 11014999 ~ 11241714 (+)
spdya spdya coding downstream 2223857 12838288 ~ 12845477 (+)
wdr43 LOC106561875 coding downstream 2248558 12862989 ~ 12899263 (+)
LOC110515264 LOC106583873 coding downstream 2933500 13547931 ~ 13554393 (+)
LOC110506268 LOC106562017 coding downstream 2953941 13568372 ~ 13718686 (+)
G1995641 NA non-coding upstream 1707 10612111 ~ 10612333 (+)
G1995640 NA non-coding upstream 2108 10611616 ~ 10611932 (+)
G1995637 NA non-coding upstream 8014 10605783 ~ 10606026 (+)
G1995633 NA non-coding upstream 13443 10600345 ~ 10600597 (+)
G1995631 NA non-coding upstream 15209 10598623 ~ 10598831 (+)
G1995645 NA non-coding downstream 255 10614686 ~ 10614898 (+)
G1995652 NA non-coding downstream 13162 10627593 ~ 10627850 (+)
G1995655 NA non-coding downstream 16130 10630561 ~ 10630765 (+)
G1995657 LOC100194703 non-coding downstream 19479 10633910 ~ 10634145 (+)
G1995658 NA non-coding downstream 19839 10634270 ~ 10634498 (+)
G1994851 NA other upstream 1047886 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 1223107 9390568 ~ 9390933 (+)
G1993783 NA other upstream 1915917 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 1945773 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 2062673 8537913 ~ 8553492 (+)
G1998628 NA other downstream 2607606 13222037 ~ 13222681 (+)
G2002614 NA other downstream 5075337 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 5180701 15734525 ~ 15800073 (+)
G2002823 NA other downstream 5457556 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 5998054 16609650 ~ 16614319 (+)

Expression


Co-expression Network