G1995712


Basic Information

Item Value
gene id G1995712
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 10709237 ~ 10710134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2284208
gacctggatagtaggacagaactctgcaggctatctttgcagtagattgcaacaccgccccctttggccgttctatcttgtctgaaaatgttgtagtttggaattaaaatgtctgaatttttggtggtcttcctaagccaggattcagacacagctagaacatccgggttggcagagtgtgctaaagcagtgaatagaacaaacttagggaggaggcttctaatgttaacatgcatgaaaccaaggctattacggttacagaagtcgtcaaaagagagcgcctggggaataggagtggagctaggcactgcagggcctggattcacctctacatcgccagaggaacataggaggagtagaataagggtgcggctaaaagcaataagaattggtcgtctagaacgtctggaacagagagtaaaaggaggtttctgggggcgataaaatagcatcaaggtataatgtacagacaaaggtaaggtaggatgtgaatacagtggaggtaaacctaggtattgagtgatgaagagagagatattgtctctagaaacataattgaaaccaggagatgtcattgcatgtgtgggtggtggaactaataggttggataaggtataatgagcaggactagaggctctacagtgaaataagccaataaacactaaccagaacagcaatggacaagacatattgacattaaggagaggcatgcttagtcgagtgatcaaaagggtccagtgagtggagaggttggttgagggtcacggcgatttagacagctagccaggccatcagtagcaagctagcataggttggagtctgttgttagccacctcttgcgttcggtcagtagattagtggggttccgtgtggtagaggggattaatccaaatcacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2284208 True 898 lncRNA 0.45 1 10709237 10710134

Neighbor

gene id symbol gene type direction distance location
gnmt gnmt coding upstream 427130 10268951 ~ 10282107 (+)
LOC110506240 NA coding upstream 743276 9944809 ~ 9965961 (+)
LOC110506241 LOC106561900 coding upstream 790942 9845927 ~ 9918295 (+)
si:ch211-266g18.10 LOC106561896 coding upstream 897139 9707454 ~ 9812098 (+)
LOC110526863 LOC106562818 coding upstream 1165964 9540286 ~ 9543273 (+)
daam2 daam2 coding downstream 304865 11014999 ~ 11241714 (+)
spdya spdya coding downstream 2128154 12838288 ~ 12845477 (+)
wdr43 LOC106561875 coding downstream 2152855 12862989 ~ 12899263 (+)
LOC110515264 LOC106583873 coding downstream 2837797 13547931 ~ 13554393 (+)
LOC110506268 LOC106562017 coding downstream 2858238 13568372 ~ 13718686 (+)
G1995710 NA non-coding upstream 2996 10706004 ~ 10706241 (+)
G1995704 NA non-coding upstream 8496 10700541 ~ 10700741 (+)
G1995703 NA non-coding upstream 8997 10699896 ~ 10700240 (+)
G1995675 NA non-coding upstream 43609 10665406 ~ 10665628 (+)
G1995668 NA non-coding upstream 63378 10645423 ~ 10645859 (+)
G1995744 NA non-coding downstream 48266 10758400 ~ 10758659 (+)
G1995749 NA non-coding downstream 53640 10763774 ~ 10763979 (+)
G1995754 NA non-coding downstream 60656 10770790 ~ 10771010 (+)
G1995755 NA non-coding downstream 61015 10771149 ~ 10771350 (+)
G1995756 NA non-coding downstream 61319 10771453 ~ 10774533 (+)
G1994851 NA other upstream 1143083 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 1318304 9390568 ~ 9390933 (+)
G1993783 NA other upstream 2011114 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 2040970 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 2157870 8537913 ~ 8553492 (+)
G1998628 NA other downstream 2511903 13222037 ~ 13222681 (+)
G2002614 NA other downstream 4979634 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 5084998 15734525 ~ 15800073 (+)
G2002823 NA other downstream 5361853 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 5902351 16609650 ~ 16614319 (+)

Expression


Co-expression Network