G1996671


Basic Information

Item Value
gene id G1996671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 11055772 ~ 11082825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2285224
tagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaaccagtGGGCATGtgcgagtgtttgtgtgtgtgagagagtatggGAGTGtgagagagtatggGAGTGTGAGAGAGTATGGGAGTGTGAGagtatttatgtatgtatgtatgtatgtatgtgcgagagtgtgtgtgtgtgagtgtgtgtgagagagagtgagtgtgtgtgagagagtatgggagtgtgtgtgagagagtatgggagtgtgtgtgtgtgtgtatgtgtgaaccaGTGGgcatgtgcaagtgtgtgtgtgtaaaccagtGGGCATGtgcgagtgtttgtgtgtgtgagagagtatgggagtgagagagagtatgGGAGTGTGAGAGAGTATGGGAGTGTGAGagtatttatgtatgtatgtatgtatgtatgtgcgagagtgtgtgtgtgtgagtgtgtgtgagagagagtgtgagtgtgtgtgagagagtacggGAtgtgcgagtgtgtgtgtgtgtaaagagagtgtgagtgtgtgagagagtttgggagtgtgagagagtatgtatgtatgtgagagagagtgtgtgtgtgtgtgagagagtgagagtgtatgggagtgtgtgtgtgtaaactagtgGGCATgtgcgagtgtgtgagagagtatgtgtgtgtgagagagtatgtgtgtgtgtgagagagattgatagtgtgtgtgtgaaagtgtgagagtgtgtgtgtgaaagtgtgtgtgaaagtgtgagagtgtgtgtgtgtgaaagtgtgtgtgtaagtgtgtgtgtgtgtacctgtggatgtatttcaaggcctaccttcaaacttagtgcctctttgcctgacatcatgggaaaaatctaaagaaaaatCAGCCACGACCTCAgataaacctccacaagtctggttcttccttgggagcaatctccaaacgcctgaaggtaccacgttcatctgcacaaacattAGTatgaaagtataaacaccatgagaccacacagccgtcataccgctcaggaaagagacgcagtcggtctcctagagatgtacgtac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2285224 True 1078 lncRNA 0.46 5 11055772 11082825

Neighbor

gene id symbol gene type direction distance location
LOC118944586 NA coding downstream 7200 11048419 ~ 11048572 (-)
kif6 kif6 coding downstream 69157 10882204 ~ 10986615 (-)
LOC110506078 kif6 coding downstream 182011 10774046 ~ 10873761 (-)
kcnk17 LOC106562019 coding downstream 321834 10693574 ~ 10733938 (-)
kcnk5a kcnk5 coding downstream 409890 10588470 ~ 10645882 (-)
mocs1 LOC100196496 coding upstream 169010 11251835 ~ 11301417 (-)
LOC118944497 NA coding upstream 240343 11323168 ~ 11325682 (-)
LOC110506257 LOC106561882 coding upstream 955307 12038132 ~ 12419690 (-)
LOC110506258 LOC106561881 coding upstream 1487372 12570197 ~ 12616568 (-)
LOC110506259 LOC106561880 coding upstream 1592739 12675564 ~ 12688280 (-)
G1996714 NA non-coding downstream 2637 11052863 ~ 11053135 (-)
G1996692 NA non-coding downstream 35275 11020288 ~ 11020497 (-)
G1996690 NA non-coding downstream 37382 11017441 ~ 11018390 (-)
G1996689 NA non-coding downstream 38976 11014956 ~ 11016796 (-)
G1996580 NA non-coding downstream 196754 10858712 ~ 10859018 (-)
G1996805 daam2 non-coding upstream 113227 11196052 ~ 11196364 (-)
G1996807 NA non-coding upstream 114103 11196928 ~ 11197202 (-)
G1996810 NA non-coding upstream 116093 11198918 ~ 11199469 (-)
G1996858 NA non-coding upstream 211859 11294684 ~ 11416836 (-)
G1996901 NA non-coding upstream 266267 11349092 ~ 11416113 (-)
G1996632 NA other downstream 131239 10922016 ~ 10924533 (-)
G1994812 NA other downstream 1554119 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1607278 9447593 ~ 9448494 (-)
G1994674 NA other downstream 1875067 9177038 ~ 9180705 (-)
LOC110516734 LOC107593117 other downstream 1947613 9090166 ~ 9108249 (-)
G1996949 NA other upstream 335274 11418099 ~ 11418335 (-)
G1999856 NA other upstream 2254510 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 2437861 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2546959 13629784 ~ 13630075 (-)
G2000879 NA other upstream 3195316 14278141 ~ 14278746 (-)

Expression


Co-expression Network