G1996980



Basic Information


Item Value
gene id G1996980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 11442385 ~ 11442588 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2285538
GGaaactgtaaagcactttgtttaaactgctgatgtaaaaatacatttgatcgaTTGATGTGTCATTAGCAACTGGCCAATTtctgaacatctcattccctcaCCTTCTATCAAACACCTTTGGAGTCATGAAAGTAGATTGAAATCGAAAACCCTGTGATGAGCGAGATATCGCACATTGTCCGTCTGCGGTTGATTTAACTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2285538 True 204 lncRNA 0.39 1 11442385 11442588

Neighbor


gene id symbol gene type direction distance location
LOC118944497 NA coding downstream 116703 11323168 ~ 11325682 (-)
mocs1 LOC100196496 coding downstream 140968 11251835 ~ 11301417 (-)
LOC118944586 NA coding downstream 393813 11048419 ~ 11048572 (-)
kif6 kif6 coding downstream 455770 10882204 ~ 10986615 (-)
LOC110506078 kif6 coding downstream 568624 10774046 ~ 10873761 (-)
LOC110506257 LOC106561882 coding upstream 595544 12038132 ~ 12419690 (-)
LOC110506258 LOC106561881 coding upstream 1127609 12570197 ~ 12616568 (-)
LOC110506259 LOC106561880 coding upstream 1232976 12675564 ~ 12688280 (-)
LOC110506260 LOC106561879 coding upstream 1272715 12715303 ~ 12740943 (-)
LOC110506264 LOC106561878 coding upstream 1333905 12776493 ~ 12835289 (-)
G1996858 NA non-coding downstream 25549 11294684 ~ 11416836 (-)
G1996901 NA non-coding downstream 26272 11349092 ~ 11416113 (-)
G1996810 NA non-coding downstream 242916 11198918 ~ 11199469 (-)
G1996807 NA non-coding downstream 245183 11196928 ~ 11197202 (-)
G1996805 daam2 non-coding downstream 246021 11196052 ~ 11196364 (-)
G1997082 NA non-coding upstream 5368 11447956 ~ 11527922 (-)
G1997147 NA non-coding upstream 88405 11530993 ~ 11536751 (-)
G1997232 NA non-coding upstream 171715 11614303 ~ 11614550 (-)
G1997241 NA non-coding upstream 178208 11620796 ~ 11621034 (-)
G1997247 NA non-coding upstream 180945 11623533 ~ 11623756 (-)
G1996949 NA other downstream 24050 11418099 ~ 11418335 (-)
G1996632 NA other downstream 517852 10922016 ~ 10924533 (-)
G1994812 NA other downstream 1940732 9500716 ~ 9501653 (-)
G1994786 NA other downstream 1993891 9447593 ~ 9448494 (-)
G1994674 NA other downstream 2261680 9177038 ~ 9180705 (-)
G1999856 NA other upstream 1894747 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 2078098 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2187196 13629784 ~ 13630075 (-)
G2000879 NA other upstream 2835553 14278141 ~ 14278746 (-)
LOC110506276 LOC106587060 other upstream 3190414 14613586 ~ 14678505 (-)

Expression



Co-expression Network