G1997241



Basic Information


Item Value
gene id G1997241
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 11620796 ~ 11621034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2285808
ctcattacccatgccaaatatattttgtttcctgagggggaataggctttgtcgtgccctcttcacaactgtcttggtgtgtttggaccattctagtttgttgttgatgtggacaccaaggaacttaaagctctcaacctgctccactacagccctgtcgatgagaatgggggcatgctaggtcctccttttcctgcagtccacaataatctccctAGTCTTGGTTAAGTTGAGGGATA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2285808 True 239 lncRNA 0.46 1 11620796 11621034

Neighbor


gene id symbol gene type direction distance location
LOC118944497 NA coding downstream 295114 11323168 ~ 11325682 (-)
mocs1 LOC100196496 coding downstream 319379 11251835 ~ 11301417 (-)
LOC118944586 NA coding downstream 572224 11048419 ~ 11048572 (-)
kif6 kif6 coding downstream 634181 10882204 ~ 10986615 (-)
LOC110506078 kif6 coding downstream 747035 10774046 ~ 10873761 (-)
LOC110506257 LOC106561882 coding upstream 417098 12038132 ~ 12419690 (-)
LOC110506258 LOC106561881 coding upstream 949163 12570197 ~ 12616568 (-)
LOC110506259 LOC106561880 coding upstream 1054530 12675564 ~ 12688280 (-)
LOC110506260 LOC106561879 coding upstream 1094269 12715303 ~ 12740943 (-)
LOC110506264 LOC106561878 coding upstream 1155459 12776493 ~ 12835289 (-)
G1997232 NA non-coding downstream 6246 11614303 ~ 11614550 (-)
G1997147 NA non-coding downstream 84045 11530993 ~ 11536751 (-)
G1997082 NA non-coding downstream 92874 11447956 ~ 11527922 (-)
G1996980 NA non-coding downstream 178208 11442385 ~ 11442588 (-)
G1996858 NA non-coding downstream 203960 11294684 ~ 11416836 (-)
G1997247 NA non-coding upstream 2499 11623533 ~ 11623756 (-)
G1997291 NA non-coding upstream 23229 11644263 ~ 11653638 (-)
G1999008 NA non-coding upstream 370911 11991945 ~ 11992317 (-)
G1999012 NA non-coding upstream 377050 11998084 ~ 12072555 (-)
G1999112 NA non-coding upstream 538338 12159372 ~ 12159650 (-)
G1996949 NA other downstream 202461 11418099 ~ 11418335 (-)
G1996632 NA other downstream 696263 10922016 ~ 10924533 (-)
G1994812 NA other downstream 2119143 9500716 ~ 9501653 (-)
G1994786 NA other downstream 2172302 9447593 ~ 9448494 (-)
G1994674 NA other downstream 2440091 9177038 ~ 9180705 (-)
G1999856 NA other upstream 1716301 13337335 ~ 13338151 (-)
G1999980 LOC106561221 other upstream 1899652 13520686 ~ 13521520 (-)
G2000052 NA other upstream 2008750 13629784 ~ 13630075 (-)
G2000879 NA other upstream 2657107 14278141 ~ 14278746 (-)
LOC110506276 LOC106587060 other upstream 3011968 14613586 ~ 14678505 (-)

Expression



Co-expression Network