Gene
RNA
| Item | Value |
|---|---|
| gene id | G1999479 |
| gene name | LOC100846954 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12701700 ~ 12702032 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2288111 | True | 333 | lncRNA | 0.50 | 1 | 12701700 | 12702032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506259 | LOC106561880 | coding | downstream | 13420 | 12675564 ~ 12688280 (-) |
| LOC110506258 | LOC106561881 | coding | downstream | 85132 | 12570197 ~ 12616568 (-) |
| LOC110506257 | LOC106561882 | coding | downstream | 282010 | 12038132 ~ 12419690 (-) |
| LOC118944497 | NA | coding | downstream | 1376018 | 11323168 ~ 11325682 (-) |
| mocs1 | LOC100196496 | coding | downstream | 1400283 | 11251835 ~ 11301417 (-) |
| LOC110506260 | LOC106561879 | coding | upstream | 13271 | 12715303 ~ 12740943 (-) |
| LOC110506264 | LOC106561878 | coding | upstream | 74461 | 12776493 ~ 12835289 (-) |
| LOC118944582 | NA | coding | upstream | 79360 | 12781392 ~ 12781526 (-) |
| LOC118944583 | NA | coding | upstream | 89879 | 12791911 ~ 12792045 (-) |
| trmt61b | trmt61b | coding | upstream | 143447 | 12845479 ~ 12856664 (-) |
| G1999477 | NA | non-coding | downstream | 760 | 12700649 ~ 12700940 (-) |
| G1999475 | NA | non-coding | downstream | 2372 | 12699034 ~ 12699328 (-) |
| G1999474 | NA | non-coding | downstream | 3181 | 12698264 ~ 12698519 (-) |
| G1999178 | NA | non-coding | downstream | 461884 | 12236799 ~ 12239816 (-) |
| G1999488 | NA | non-coding | upstream | 11407 | 12713439 ~ 12713733 (-) |
| G1999502 | NA | non-coding | upstream | 40038 | 12742070 ~ 12742271 (-) |
| G1999505 | LOC103376403 | non-coding | upstream | 42979 | 12745011 ~ 12745250 (-) |
| G1999517 | NA | non-coding | upstream | 53432 | 12755464 ~ 12759728 (-) |
| G1999586 | NA | non-coding | upstream | 205370 | 12907402 ~ 12954741 (-) |
| G1996949 | NA | other | downstream | 1283365 | 11418099 ~ 11418335 (-) |
| G1996632 | NA | other | downstream | 1777167 | 10922016 ~ 10924533 (-) |
| G1994812 | NA | other | downstream | 3200047 | 9500716 ~ 9501653 (-) |
| G1994786 | NA | other | downstream | 3253206 | 9447593 ~ 9448494 (-) |
| G1994674 | NA | other | downstream | 3520995 | 9177038 ~ 9180705 (-) |
| G1999856 | NA | other | upstream | 635303 | 13337335 ~ 13338151 (-) |
| G1999980 | LOC106561221 | other | upstream | 818654 | 13520686 ~ 13521520 (-) |
| G2000052 | NA | other | upstream | 927752 | 13629784 ~ 13630075 (-) |
| G2000879 | NA | other | upstream | 1576109 | 14278141 ~ 14278746 (-) |
| LOC110506276 | LOC106587060 | other | upstream | 1930970 | 14613586 ~ 14678505 (-) |
