Gene
RNA
| Item | Value |
|---|---|
| gene id | G1998316 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 12742511 ~ 12742918 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_17880 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2286909 | True | 408 | lncRNA | 0.47 | 1 | 12742511 | 12742918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| daam2 | daam2 | coding | upstream | 1500797 | 11014999 ~ 11241714 (+) |
| gnmt | gnmt | coding | upstream | 2460404 | 10268951 ~ 10282107 (+) |
| LOC110506240 | NA | coding | upstream | 2776550 | 9944809 ~ 9965961 (+) |
| LOC110506241 | LOC106561900 | coding | upstream | 2824216 | 9845927 ~ 9918295 (+) |
| si:ch211-266g18.10 | LOC106561896 | coding | upstream | 2930413 | 9707454 ~ 9812098 (+) |
| spdya | spdya | coding | downstream | 95370 | 12838288 ~ 12845477 (+) |
| wdr43 | LOC106561875 | coding | downstream | 120071 | 12862989 ~ 12899263 (+) |
| LOC110515264 | LOC106583873 | coding | downstream | 805013 | 13547931 ~ 13554393 (+) |
| LOC110506268 | LOC106562017 | coding | downstream | 825454 | 13568372 ~ 13718686 (+) |
| LOC118944575 | NA | coding | downstream | 948164 | 13691082 ~ 13691136 (+) |
| G1998292 | LOC106561879 | non-coding | upstream | 1781 | 12715306 ~ 12740730 (+) |
| G1998299 | NA | non-coding | upstream | 28588 | 12713712 ~ 12713923 (+) |
| G1998297 | NA | non-coding | upstream | 30817 | 12711473 ~ 12711694 (+) |
| G1998296 | NA | non-coding | upstream | 31134 | 12711059 ~ 12711377 (+) |
| G1998288 | NA | non-coding | upstream | 41234 | 12701064 ~ 12701277 (+) |
| G1998319 | NA | non-coding | downstream | 5872 | 12748790 ~ 12748998 (+) |
| G1998350 | LOC106561878 | non-coding | downstream | 54507 | 12797425 ~ 12800199 (+) |
| G1998506 | NA | non-coding | downstream | 318611 | 13061529 ~ 13061781 (+) |
| G1998515 | NA | non-coding | downstream | 329950 | 13072868 ~ 13073555 (+) |
| G1994851 | NA | other | upstream | 3176357 | 9560723 ~ 9566154 (+) |
| G1994757 | LOC106613263 | other | upstream | 3351578 | 9390568 ~ 9390933 (+) |
| G1993783 | NA | other | upstream | 4044388 | 8697174 ~ 8698123 (+) |
| G1993771 | herc1 | other | upstream | 4074244 | 8666601 ~ 8668267 (+) |
| LOC110512379 | LOC106587994 | other | upstream | 4191144 | 8537913 ~ 8553492 (+) |
| G1998628 | NA | other | downstream | 479119 | 13222037 ~ 13222681 (+) |
| G2002614 | NA | other | downstream | 2946850 | 15689768 ~ 15696280 (+) |
| LOC110506284 | LOC106561914 | other | downstream | 3052214 | 15734525 ~ 15800073 (+) |
| G2002823 | NA | other | downstream | 3329069 | 16071987 ~ 16074044 (+) |
| fshb | LOC100136594 | other | downstream | 3869567 | 16609650 ~ 16614319 (+) |
