G1998628


Basic Information

Item Value
gene id G1998628
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 13222037 ~ 13222681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2287233
GATTGTGGCTGACTTTCCAACAGCATCTTACCTACAttgctctgtaccaaaacaattgttgttaaatgtaacgtaaacaagtattcttactaaaataagctttcgtatcaaacccgacgtcccgagtcattactaaGAAGTTAGTTAATCTAAAAGTTGGTGCCGAAACCCGGGAATATGAGCTGCGACGAAGAAGTGGCTGAAATGACTGAGGAGGAACGTCGGCATGAAGCAGAAAGAATGAGACGAAAGCGGGGTACCATTCGAGGCGCAACAACGCGGATTTTGAATCAGATTGACGTGGAAATATCCCAGTCAAATCCGGATACCGATCACTTGAGTACATTGTTGGAATTGCTATCCGCTAAGGAGGACAGTTTGTTTGAGCTCGATCGTGGAATTGACGGATTGGAGGCAGAGATTGCATGCACGGAGGATTACAAAGAACGCATTATCATGCTGAGGAGCCGTGCACAAAGAGTGATAACGAAGAAACAGGACGTCAATCCACTACCAGCCCAGGTGAGTGACGCTAACTCAAACATATCACAGAGACAATCAGTAAGGCTTCCGAAGTTGATTATTGAGAAATTCTATGGAGATGTCAGTATGTGGCAGGAGTTTTGGAGCCaatatgagaatgct

Function

NR:

description
PREDICTED: mitogen-activated protein kinase 4-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2287233 True 645 TUCP 0.44 1 13222037 13222681

Neighbor

gene id symbol gene type direction distance location
wdr43 LOC106561875 coding upstream 322774 12862989 ~ 12899263 (+)
spdya spdya coding upstream 376560 12838288 ~ 12845477 (+)
daam2 daam2 coding upstream 1980323 11014999 ~ 11241714 (+)
gnmt gnmt coding upstream 2939930 10268951 ~ 10282107 (+)
LOC110506240 NA coding upstream 3256076 9944809 ~ 9965961 (+)
LOC110515264 LOC106583873 coding downstream 325250 13547931 ~ 13554393 (+)
LOC110506268 LOC106562017 coding downstream 345691 13568372 ~ 13718686 (+)
LOC118944575 NA coding downstream 468401 13691082 ~ 13691136 (+)
LOC110506269 cssa11h2orf71 coding downstream 591868 13814549 ~ 13821198 (+)
LOC110506270 LOC106561902 coding downstream 652539 13875220 ~ 14283131 (+)
G1998616 NA non-coding upstream 18131 13203707 ~ 13203906 (+)
G1998536 NA non-coding upstream 121628 13100193 ~ 13100409 (+)
G1998533 NA non-coding upstream 123980 13097716 ~ 13098057 (+)
G1998517 NA non-coding upstream 144530 13077278 ~ 13077507 (+)
G1998515 NA non-coding upstream 148482 13072868 ~ 13073555 (+)
G1998635 NA non-coding downstream 11462 13234143 ~ 13234428 (+)
G1998642 LOC100380853 non-coding downstream 20041 13242722 ~ 13242947 (+)
G1998647 NA non-coding downstream 27915 13250596 ~ 13250819 (+)
G1998655 NA non-coding downstream 42045 13264726 ~ 13264949 (+)
G1998657 NA non-coding downstream 44484 13267165 ~ 13267456 (+)
G1994851 NA other upstream 3655883 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 3831104 9390568 ~ 9390933 (+)
G1993783 NA other upstream 4523914 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 4553770 8666601 ~ 8668267 (+)
LOC110512379 LOC106587994 other upstream 4670670 8537913 ~ 8553492 (+)
G2002614 NA other downstream 2467087 15689768 ~ 15696280 (+)
LOC110506284 LOC106561914 other downstream 2572451 15734525 ~ 15800073 (+)
G2002823 NA other downstream 2849306 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 3389804 16609650 ~ 16614319 (+)
G2004946 LOC106587126 other downstream 4647878 17870559 ~ 17880793 (+)

Expression


Co-expression Network