Gene
RNA
| Item | Value |
|---|---|
| gene id | G1999858 |
| gene name | LOC107575789 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 13340296 ~ 13340781 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2288514 | True | 486 | lncRNA | 0.48 | 1 | 13340296 | 13340781 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trmt61b | trmt61b | coding | downstream | 483632 | 12845479 ~ 12856664 (-) |
| LOC110506264 | LOC106561878 | coding | downstream | 505007 | 12776493 ~ 12835289 (-) |
| LOC118944583 | NA | coding | downstream | 548251 | 12791911 ~ 12792045 (-) |
| LOC118944582 | NA | coding | downstream | 558770 | 12781392 ~ 12781526 (-) |
| LOC110506260 | LOC106561879 | coding | downstream | 599353 | 12715303 ~ 12740943 (-) |
| LOC110506271 | LOC106561903 | coding | upstream | 977523 | 14318304 ~ 14368873 (-) |
| LOC110506081 | prmt3 | coding | upstream | 1036637 | 14377418 ~ 14496552 (-) |
| LOC110506276 | LOC106587060 | coding | upstream | 1272805 | 14613586 ~ 14678505 (-) |
| LOC110506082 | LOC106561908 | coding | upstream | 1362327 | 14703108 ~ 14788733 (-) |
| LOC110506277 | NA | coding | upstream | 1553714 | 14894495 ~ 14898577 (-) |
| G1999852 | NA | non-coding | downstream | 8105 | 13331919 ~ 13332191 (-) |
| G1999842 | NA | non-coding | downstream | 27588 | 13312487 ~ 13312708 (-) |
| G1999834 | NA | non-coding | downstream | 44769 | 13295059 ~ 13295527 (-) |
| G1999819 | NA | non-coding | downstream | 59996 | 13280030 ~ 13280300 (-) |
| G1999802 | NA | non-coding | downstream | 85868 | 13254224 ~ 13254428 (-) |
| G1999962 | NA | non-coding | upstream | 150826 | 13491607 ~ 13511200 (-) |
| G1999974 | NA | non-coding | upstream | 171244 | 13512025 ~ 13512490 (-) |
| G1999981 | LOC106572279 | non-coding | upstream | 181317 | 13522098 ~ 13523022 (-) |
| G2000024 | NA | non-coding | upstream | 242442 | 13583223 ~ 13584752 (-) |
| G2000041 | NA | non-coding | upstream | 274699 | 13615480 ~ 13615686 (-) |
| G1999856 | NA | other | downstream | 2145 | 13337335 ~ 13338151 (-) |
| G1996949 | NA | other | downstream | 1921961 | 11418099 ~ 11418335 (-) |
| G1996632 | NA | other | downstream | 2415763 | 10922016 ~ 10924533 (-) |
| G1994812 | NA | other | downstream | 3838643 | 9500716 ~ 9501653 (-) |
| G1994786 | NA | other | downstream | 3891802 | 9447593 ~ 9448494 (-) |
| G1999980 | LOC106561221 | other | upstream | 179905 | 13520686 ~ 13521520 (-) |
| G2000052 | NA | other | upstream | 289003 | 13629784 ~ 13630075 (-) |
| G2000879 | NA | other | upstream | 937360 | 14278141 ~ 14278746 (-) |
| G2003219 | LOC106561912 | other | upstream | 2374767 | 15715548 ~ 15718308 (-) |
