G1999974



Basic Information


Item Value
gene id G1999974
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 13512025 ~ 13512490 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2288635
GTAGCAAGTAGCTAGTAGTGAAGGGAATTTTGGCTCGATTTACTGACTCATTCAGTTCAATTGaatcagtcaaatcaaatcaaattttatttgtcacatacaaatggttagcagatgtgtagcaaaatgcttgtgcttctagttccgaccatgcagtaatatctaacaagtaatctaacctaacaatttcacaacaactaccttatacacacaagtgtaaaggactgactaagaatatgtacatagaaATATATGAATGAACGATGgtcgaacggcataggcaagatgcagtagatggaatagagtacagtatatacatatgcgatgagtaatgtagggtatgtaaacattatataaagtggcattgtttaaagtggctagtgatacatttattacatccattttttcattattaaagtggctagagatgagttagtatgttggcagcagccactcaatgtaaatt

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2288635 True 466 lncRNA 0.34 1 13512025 13512490

Neighbor


gene id symbol gene type direction distance location
trmt61b trmt61b coding downstream 655361 12845479 ~ 12856664 (-)
LOC110506264 LOC106561878 coding downstream 676736 12776493 ~ 12835289 (-)
LOC118944583 NA coding downstream 719980 12791911 ~ 12792045 (-)
LOC118944582 NA coding downstream 730499 12781392 ~ 12781526 (-)
LOC110506260 LOC106561879 coding downstream 771082 12715303 ~ 12740943 (-)
LOC110506271 LOC106561903 coding upstream 805814 14318304 ~ 14368873 (-)
LOC110506081 prmt3 coding upstream 864928 14377418 ~ 14496552 (-)
LOC110506276 LOC106587060 coding upstream 1101096 14613586 ~ 14678505 (-)
LOC110506082 LOC106561908 coding upstream 1190618 14703108 ~ 14788733 (-)
LOC110506277 NA coding upstream 1382005 14894495 ~ 14898577 (-)
G1999962 NA non-coding downstream 825 13491607 ~ 13511200 (-)
G1999858 LOC107575789 non-coding downstream 171244 13340296 ~ 13340781 (-)
G1999852 NA non-coding downstream 179834 13331919 ~ 13332191 (-)
G1999842 NA non-coding downstream 199317 13312487 ~ 13312708 (-)
G1999834 NA non-coding downstream 216498 13295059 ~ 13295527 (-)
G1999981 LOC106572279 non-coding upstream 9608 13522098 ~ 13523022 (-)
G2000024 NA non-coding upstream 70733 13583223 ~ 13584752 (-)
G2000041 NA non-coding upstream 102990 13615480 ~ 13615686 (-)
G2000042 NA non-coding upstream 106149 13618639 ~ 13618874 (-)
G2000049 NA non-coding upstream 114537 13627027 ~ 13627379 (-)
G1999856 NA other downstream 173874 13337335 ~ 13338151 (-)
G1996949 NA other downstream 2093690 11418099 ~ 11418335 (-)
G1996632 NA other downstream 2587492 10922016 ~ 10924533 (-)
G1994812 NA other downstream 4010372 9500716 ~ 9501653 (-)
G1994786 NA other downstream 4063531 9447593 ~ 9448494 (-)
G1999980 LOC106561221 other upstream 8196 13520686 ~ 13521520 (-)
G2000052 NA other upstream 117294 13629784 ~ 13630075 (-)
G2000879 NA other upstream 765651 14278141 ~ 14278746 (-)
G2003219 LOC106561912 other upstream 2203058 15715548 ~ 15718308 (-)

Expression



Co-expression Network