G2000024


Basic Information

Item Value
gene id G2000024
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 13583223 ~ 13584752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2288685
CCGCTTTAAAAATAGAATTCAGAGCATTGGTTGACTTGGTCCTGAAGAAAGAGTATATAAGAAGCATGCTTTCAATGGAAAGACATGATAGTGCCACTTGACTTATCACTGACAGACAGCTCGTGATACTTCAACTATCATCAACCTAAAAGGTAATATCTGACTTTCATACTCTAGAACAATTGTATCTCTTGACTTCTGATTTCTGAACGAGACATACTGAGACAACCACCCAATACACTCCTTGTGCTGAATACATCCACCTCCTAACCGGAGTGGATAAATAGCATCAGTGGTGTTACAAAGGGTCTTGATCTCGAACAGTTCTCTCCACTAATCTGTAAATCATAGTACAACTTCTAGTAGGAGAAACAGATACTGAGTGATTGGATAAGCCTCTGGAGAAATTGTGAGTGGAAGAACATACTCTTTGGGGACCAACCAGGTCAACCTGCGGAAAGgacaatgacccaacacacctccaggctgtgtaagggctatttgatcaagaaggagagtgatggacttctgcatcagatgacctggcctccacaatcaccccgacctcaacccagttgatatggtttgggatgagtttgaccgcagagggaaggaaaagaatccaacaagtgctcagaatgtggtaaatccttcaagactgctggaaaagcattccaggtgaagctggttgagaaaatcctaagaatgtgcaaagctgtcatctaggaaaagggtggctactttgaagaatctcaaatataaaatatatttagacttgtttaacatttttgttggttactacatgattccatataagttatttcatcattttgatgtcttcactattattttacaatgtagaaaatagtaaaaataaagaaaaacccttgaatgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2288685 True 896 lncRNA 0.40 2 13583223 13584752

Neighbor

gene id symbol gene type direction distance location
trmt61b trmt61b coding downstream 726559 12845479 ~ 12856664 (-)
LOC110506264 LOC106561878 coding downstream 747934 12776493 ~ 12835289 (-)
LOC118944583 NA coding downstream 791178 12791911 ~ 12792045 (-)
LOC118944582 NA coding downstream 801697 12781392 ~ 12781526 (-)
LOC110506260 LOC106561879 coding downstream 842280 12715303 ~ 12740943 (-)
LOC110506271 LOC106561903 coding upstream 733552 14318304 ~ 14368873 (-)
LOC110506081 prmt3 coding upstream 792666 14377418 ~ 14496552 (-)
LOC110506276 LOC106587060 coding upstream 1028834 14613586 ~ 14678505 (-)
LOC110506082 LOC106561908 coding upstream 1118356 14703108 ~ 14788733 (-)
LOC110506277 NA coding upstream 1309743 14894495 ~ 14898577 (-)
G1999981 LOC106572279 non-coding downstream 60201 13522098 ~ 13523022 (-)
G1999974 NA non-coding downstream 70733 13512025 ~ 13512490 (-)
G1999962 NA non-coding downstream 72023 13491607 ~ 13511200 (-)
G1999858 LOC107575789 non-coding downstream 242442 13340296 ~ 13340781 (-)
G1999852 NA non-coding downstream 251032 13331919 ~ 13332191 (-)
G2000041 NA non-coding upstream 30728 13615480 ~ 13615686 (-)
G2000042 NA non-coding upstream 33887 13618639 ~ 13618874 (-)
G2000049 NA non-coding upstream 42275 13627027 ~ 13627379 (-)
G2000068 NA non-coding upstream 64287 13649039 ~ 13649244 (-)
G2000096 NA non-coding upstream 107516 13692268 ~ 13692469 (-)
G1999980 LOC106561221 other downstream 61703 13520686 ~ 13521520 (-)
G1999856 NA other downstream 245072 13337335 ~ 13338151 (-)
G1996949 NA other downstream 2164888 11418099 ~ 11418335 (-)
G1996632 NA other downstream 2658690 10922016 ~ 10924533 (-)
G1994812 NA other downstream 4081570 9500716 ~ 9501653 (-)
G2000052 NA other upstream 45032 13629784 ~ 13630075 (-)
G2000879 NA other upstream 693389 14278141 ~ 14278746 (-)
G2003219 LOC106561912 other upstream 2130796 15715548 ~ 15718308 (-)
nav2a LOC106587075 other upstream 2370875 15900960 ~ 16211028 (-)

Expression


Co-expression Network