G2001449


Basic Information

Item Value
gene id G2001449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 14586587 ~ 14587853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2290165
gccaccctttgccttgacagagaaacgacagtccatcattactttaaaacatgaaggtcagtcaatgtggaaaatgtcaagaactttgaatgtttcttcaagtgaagTTGCAAAAAACCATCAatctctatgatgaaactggcaatCATGAGGACCGCCAGAGGAAAGGAATACCCcgagttaccactgctgcagaggataagttcattaaagttactTGCCTCAGAagttgcaacccaaataaatgcttcacaaagttcaagtaacagacaccaaCAGCAACTGTTCTGAGACTGCGTGAAATCCGGAACTTCATAGTGAAATTGCTGCAACAAAAATAAAACaccactaaaaggacaccaataagaagagacttgcttgggccaagaaacacaagcaatggacattagaccagtggaaagtccaaatttgagattttggttccaaccaccaagTCTTTGGAAGACGCTGAGtaagtgaacagatgatctctgcatgtatggttcccacagtgaagcatggaggaggaggtatgatggtgctttgctggttacactgtcagtgatttaaatagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcaatacaccatcccatctggtttgtgcttcaTGTTagctaggcaagttagttaagaacaaattcttatttacaatgacggcctaccaaaaggcaaatggcctcctgcggggatgttGGCTGGGATTACAAATAAACTTATTGAAGTAAAAATATGGGAGAGACATaagatgacaacacagcatggcagcagcacaacatggcagcagcacaaaacagggtacaaacaccGTTggccacagacaacagcacaaatggcaaggtagagacaacagtacaccatacaaagcagccacaactgtcagtaagagtgtccatgattgagtctttgagtgaagagattgagataaaactgtccagtttgagtgtttgttgcagctcgttccaggcgctagctgcagcgaactaaAAAGACAAGTGACCcaaggatgtgtgtgctttggggaccattaacagaatgtgactggcagaacgggtgatGTATGTGGATGATGAGGACTGGAGTAGATATCTCAGTTAAAACCTAAGAaggtttttataaataagcaacaACCAGTGGATCTTGTGACGGGTATTCAAAGATAagcagtttacagaagagtatacTGTAGAGTGCAGTGACGTGTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2290165 True 1247 lncRNA 0.43 2 14586587 14587853

Neighbor

gene id symbol gene type direction distance location
LOC110506081 prmt3 coding downstream 90035 14377418 ~ 14496552 (-)
LOC110506271 LOC106561903 coding downstream 217714 14318304 ~ 14368873 (-)
trmt61b trmt61b coding downstream 1729923 12845479 ~ 12856664 (-)
LOC118944583 NA coding downstream 1794542 12791911 ~ 12792045 (-)
LOC118944582 NA coding downstream 1805061 12781392 ~ 12781526 (-)
LOC110506276 LOC106587060 coding upstream 25733 14613586 ~ 14678505 (-)
LOC110506082 LOC106561908 coding upstream 115255 14703108 ~ 14788733 (-)
LOC110506277 NA coding upstream 306642 14894495 ~ 14898577 (-)
LOC110506083 LOC106587061 coding upstream 498335 15086188 ~ 15095528 (-)
LOC110506281 LOC106561910 coding upstream 524716 15112569 ~ 15147518 (-)
G2001416 NA non-coding downstream 45457 14540907 ~ 14541130 (-)
G2001414 NA non-coding downstream 47154 14539137 ~ 14539433 (-)
G2000882 NA non-coding downstream 297720 14283071 ~ 14288867 (-)
G2000883 NA non-coding downstream 303736 14281834 ~ 14282851 (-)
G2001456 NA non-coding upstream 19035 14606888 ~ 14621874 (-)
G2001473 NA non-coding upstream 41347 14629200 ~ 14629466 (-)
G2001482 NA non-coding upstream 60582 14648435 ~ 14648692 (-)
G2001489 NA non-coding upstream 75352 14663205 ~ 14674139 (-)
G2000879 NA other downstream 307841 14278141 ~ 14278746 (-)
G2000052 NA other downstream 956512 13629784 ~ 13630075 (-)
G1999980 LOC106561221 other downstream 1065067 13520686 ~ 13521520 (-)
G1999856 NA other downstream 1248436 13337335 ~ 13338151 (-)
G1996949 NA other downstream 3168252 11418099 ~ 11418335 (-)
G2003219 LOC106561912 other upstream 1127695 15715548 ~ 15718308 (-)
nav2a LOC106587075 other upstream 1367774 15900960 ~ 16211028 (-)
G2003819 LOC106561933 other upstream 2133138 16720991 ~ 16723682 (-)
G2005166 NA other upstream 3299592 17887445 ~ 17890081 (-)

Expression

G2001449 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G2001449 Expression in each Bioproject

Bar chart with 19 bars.
G2001449 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network