Gene
RNA
| Item | Value |
|---|---|
| gene id | G2001189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 14678013 ~ 14678618 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2289887 | True | 501 | lncRNA | 0.48 | 2 | 14678013 | 14678618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506274 | LOC106561907 | coding | upstream | 80866 | 14576878 ~ 14597147 (+) |
| rlbp1a | LOC106561906 | coding | upstream | 113438 | 14541917 ~ 14564575 (+) |
| LOC110506272 | LOC106561904 | coding | upstream | 156800 | 14499547 ~ 14521213 (+) |
| LOC110506270 | LOC106561902 | coding | upstream | 394882 | 13875220 ~ 14283131 (+) |
| LOC110506269 | cssa11h2orf71 | coding | upstream | 856815 | 13814549 ~ 13821198 (+) |
| LOC110506278 | LOC106561909 | coding | downstream | 237416 | 14916034 ~ 15085102 (+) |
| LOC110506282 | LOC106561911 | coding | downstream | 593884 | 15272502 ~ 15365797 (+) |
| LOC110506084 | LOC106561912 | coding | downstream | 961266 | 15639884 ~ 15672938 (+) |
| LOC110506283 | LOC106561912 | coding | downstream | 1038130 | 15716748 ~ 15731540 (+) |
| LOC110506284 | LOC106561914 | coding | downstream | 1055907 | 15734525 ~ 15800073 (+) |
| G2001168 | NA | non-coding | upstream | 34288 | 14643415 ~ 14643725 (+) |
| G2001165 | NA | non-coding | upstream | 37806 | 14639827 ~ 14640207 (+) |
| G2001162 | NA | non-coding | upstream | 49569 | 14628164 ~ 14628444 (+) |
| G2001160 | NA | non-coding | upstream | 51491 | 14626307 ~ 14626522 (+) |
| G2001127 | NA | non-coding | upstream | 139071 | 14538731 ~ 14538942 (+) |
| G2001192 | NA | non-coding | downstream | 3636 | 14682254 ~ 14682571 (+) |
| G2001209 | NA | non-coding | downstream | 21767 | 14700385 ~ 14700627 (+) |
| G2001210 | NA | non-coding | downstream | 22628 | 14701246 ~ 14701472 (+) |
| G2001922 | NA | non-coding | downstream | 472799 | 15151417 ~ 15151648 (+) |
| G2001939 | NA | non-coding | downstream | 484298 | 15162916 ~ 15163151 (+) |
| G1998628 | NA | other | upstream | 1455332 | 13222037 ~ 13222681 (+) |
| G1994851 | NA | other | upstream | 5111859 | 9560723 ~ 9566154 (+) |
| G1994757 | LOC106613263 | other | upstream | 5287080 | 9390568 ~ 9390933 (+) |
| G1993783 | NA | other | upstream | 5979890 | 8697174 ~ 8698123 (+) |
| G1993771 | herc1 | other | upstream | 6009746 | 8666601 ~ 8668267 (+) |
| G2002614 | NA | other | downstream | 1011150 | 15689768 ~ 15696280 (+) |
| G2002823 | NA | other | downstream | 1393369 | 16071987 ~ 16074044 (+) |
| fshb | LOC100136594 | other | downstream | 1933867 | 16609650 ~ 16614319 (+) |
| G2004946 | LOC106587126 | other | downstream | 3191941 | 17870559 ~ 17880793 (+) |
