G2002614


Basic Information

Item Value
gene id G2002614
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 15689768 ~ 15696280 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2291409
taaaaaccaagccatgaggtcgaaggaattgtctgtagagctttgagacaggattgtgtcaaggcacagatctggggaagggtaaaaaaacaaattcttcagcattgaaggtccccaagaacacagtggcctccagcgttcttaaatggaagaagtttggaaccagcaacacttcctatagctggccgcccggccaaaccgAGAAAtcggatggtcactctgacagagctctagagttcctctgtggagattggagaactttccagaagaacaatcgtctctgcagcactccaccaatcaggcctttatggtagagtggcaagacggaagccactcctctgtaaaaggcacatgacagccctcttggattttgccaaaaggcacctgatggactctcagaccatgaggaacaagattctctgggctgatgaaaccaagtttaaaatctttggcctgaatgccaagtgtcacgtctggaggaaacctggcaccatccctacagtgaagcatggtggtggcagcatcatgctgtggggatgtttttcagcagcagggactgtgagactagtcaggatcaagggaaagatggacggagcaaagtacagagagatccttgatgaaaacctgatccagagcgctcaggacctcagactggggcgaaggttcaccttccaacaggtcaatgaccctaagcacacagccaagacaacgcaggagtggcttcgagacaagtctctgggTGTCCTTGCGTGGCCCAGTTCGGGCCAGGACTCAAacatctgaaaatagctgtgtcccatccccatccaacctgacagagcttcaaaggatctgcagagaagaatgggacaaactcaccaaatacaggtgtgccaagcttgtgatgtcatacccaagaagacttgaggctgtcatcgctgccaacggtgcttcaacaaagtactgagtaaagggtctgaatacttttgcaaatgTGATACTTCCAGAGggtaaataaatttaaaaaaacatttagaaaaacctgtttttgctttttcatcaTGTAGTACTGCatttaatataaaatatatataatctattttagaataaagctgtaacaacaaaatgtggcaaaagtcaaggtgtctgaatactttccgaatgcactgtaccccTATTTCTCAGCTCCAATCTCTGTATACCTCAGGTCACTTACCCACACACCTAAACCAAATTACTCACACATCCCAGCCCTGTTACCCTCATGCCCTAAAACTAACACCCAGAATCATCAGatcacttgttttggtactgccctgtttttggtcgcaggttcaggaatgaCTGAAAAATTGCAACATTTATATGGAGCTAGCTCttcaaatagcactgctgggggatttgaaaagtcatagtcaatcggcccataatataataatacatcatTTACAATCTGTATAAACTATgaaaatagaaaggttcagaacctTTGTGAAACATCTCAGCACAGTGGGAAAATATATGGCAGCTAGAAATCAAAacgggatggtcttcagagatgcaatagatggtaggggttgagggtagctgaaggctgggactaaaAACAAGCAAAAGATAAGTAATGTAAAATATattgtccgtaaaatgtatataatatgtataagctggaagtagaagcctaagtattgttgtccatttGTTTACTCAAATTAGGGGAGGGGtgaaagggttaggggaaaataataaagaaggtaaatatattttaaaatgtatacagtatcactcaaaagtttggacacacctactcattcaagggttttcctttatttgtactatttttacATTGGAgtataatggtgaagacatcaatactaagaaataacacagaagcttgatgccctcaacctcacacaaattatcaatgaacctaccaggtacaaccccaaaacCGTATACACggacaccctcatagatatcatcttaaccaccctctaaatacacctctgctgttttcaaccaagatcttagcaatcactgcctcattagcAATCACTGCCACAttcgtaatgggtctgcggtcaaacgacctcccctcatcactgtcaaacgctccctgaaacacttcagcgagcaggcctttctaatcgacctggcccgggtgtcctggaaggatattgacctcatcccgtcagtagagcaTTCCtgattattctttaaaaatgccttcctcaccatcttaaataagcatgtgtcacgtcctgaccttagttcctatTGTATgtttctgttttagtttggtcagggcgtgagttggggtggacattcaatatttttgttctatgttgtgtatttctgcttttggcctggtattgttcccaatcagaggcagctgtcaatcgttgtctctgtaTGAGAACCATTCTTAGGTAGCCTATTTTCCCACTCTTgtttccagtgtttaattgctatattgtatttacttcgccaccatggcctatttattgcctcccttatctcaactcatttgcacacattgtaaatagacttgtttttctactgtattattgactgtatgtttgtttactccatgtgttactctgtgttgttgtatgtgtcgaactgcttagctttatcttggccaggtcgtagttgtaaattataacttgttctcaacttgcctacctggttaaataaagttgaaataaaatcaaaatatattttatatttgagattcttcaaagtagtcaccctttgccttgatgacagctttgcacactcttggcattctcccaaccagcttcatgaggtagtcatctggaatgcatttcaattaacaggtgtgccttgtttaaagttcatttgtagaatttaattccttcttaatgcgtttgagccaatcagttgtgttgtgacaaggtaggggtggtatacagaacatagctCTAttcggtaaaagaccaagtccatattatggcaagaacagctcaaataagcaaaaataaTAACATTACTTTGTTATGTTCTAAATAATAGGGTAAAAATTGACGGAAAACTataaaagctcaaaccaagtttattcacccaaagGGTCGGACAGCTGAACTGCTGAACAGACAAAAAAACATATTCACACAAGTACTGGTATTTAACCTTTTCTCCTATGCTGAGCCCCCTCCTtacacatctgaacagccaataCACCTCTGTTGCTAGACAAAACTTTATTGATATCTGTTCTTCATCTAACCTGACCTCTGCCCaaattcctctctcctccccaactcacggcTGTCATGTTGACTTGTACCATACTGGGTATCTTCTCCTTCCATTggatccctgatggctaacaataacatatcctgacaGAATGTAAACGTTCAACATTCCCCTCTCGCCCTCAGTGGCATGAATaaggatatttcatatttttaagtttagaagtcagaacccatcatttgtaagacatgaaggtcagtcaatacagaacatttttggaactttgaaagtttcttcaagtgcagtcgcaaaatacatcaagcgttatgatgaaactggctcacctGAGGACTgccactggaaaggaagacctagagttacctctgctgcagaggatatgttcattagagttcactgcacctcagattgcagcccaaatactgtaaatgcttcagagttcaagtaacagacacatttcaacatcaactgttcagaggatactgtttgaatcaggccttcattgttggatttctgcaaagaaaccactactaaagaacaccaataagaggacttgcttgggccaagaagcacaagcaatggacattagaccagtggaaatctgtcctttggtctaatgagtccaaatttgagatttttaattccaaccaccgtgtctttgtgagatgcagagtaggtgaacagataatctccacatgtgtggttcccaccgtgaagcatggaggtaggatgtgtgatggtgtgggggaggtttggtggtgacactgtctgtgatttatttagaattcaaggcacacttaaccaccaTGGCTATCACAGTATTTTGCAGcgacacgccatcccatctggtttgcacttagtgggactatcatttgtttttcaacaggacaatcacctccaggctgtgtaagggctatttgaccatggagagtgatggagtgctgcataagataatctggcctccacaatcacctgacctcaacccaattgagatggtttgggatgagatggatcacagagtgaaggaaaaacagccaaaaagtgctcagcatatgtgggaactccatcaagactattggaaagcattcctcatgaagctggttaagagaatgccaagagcatacaaagctgtcatcaagttaaagggtggctactttgaagaacataaaatataacatgtattttgatttaacactttttgggttactaaatgattccatatgtgttatttcacagttttgatgtcttcactattattctacaatgtagaaaatagtaaaaataaagaaaaacccttgaatgagtaggtgtgtccaaacttttgactggtactgcatatttacaaaaaaaatacatatgggttattggaaatgatgcagacaattacattgatagaagccatAATATGTCTGCAATATAGCTGATTTAAGAAAAACCCACATCCCAGTACACTCTTATTGATACAATCAAGTACAGATACATTCATATCTTAGCCCTAAATGCCCGATTTGTTAATCATAAACCCCAGGTCCTTtggttcgttgctccagagccttt

Function

NR:

description
PREDICTED: zinc finger protein 271-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2291409 True 4776 TUCP 0.41 2 15689768 15696280

Neighbor

gene id symbol gene type direction distance location
LOC110506084 LOC106561912 coding upstream 16830 15639884 ~ 15672938 (+)
LOC110506282 LOC106561911 coding upstream 323971 15272502 ~ 15365797 (+)
LOC110506278 LOC106561909 coding upstream 604666 14916034 ~ 15085102 (+)
LOC110506274 LOC106561907 coding upstream 1092621 14576878 ~ 14597147 (+)
rlbp1a LOC106561906 coding upstream 1125193 14541917 ~ 14564575 (+)
LOC110506283 LOC106561912 coding downstream 20468 15716748 ~ 15731540 (+)
LOC110506284 LOC106561914 coding downstream 38245 15734525 ~ 15800073 (+)
dbx1a LOC106561921 coding downstream 200232 15896512 ~ 15900668 (+)
LOC110506289 LOC106561922 coding downstream 515315 16211595 ~ 16225077 (+)
csrp3 csrp3 coding downstream 529913 16226193 ~ 16233614 (+)
G2002608 NA non-coding upstream 1474 15646564 ~ 15688294 (+)
G2002604 NA non-coding upstream 45323 15644202 ~ 15644445 (+)
G2002593 NA non-coding upstream 56085 15633481 ~ 15633683 (+)
G2002585 NA non-coding upstream 61353 15628091 ~ 15628415 (+)
G2002572 NA non-coding upstream 77174 15612194 ~ 15612594 (+)
G2002673 LOC106587072 non-coding downstream 108987 15805267 ~ 15805728 (+)
G2002708 NA non-coding downstream 177553 15873833 ~ 15874088 (+)
G2002713 NA non-coding downstream 188966 15885246 ~ 15885458 (+)
G2002714 NA non-coding downstream 189656 15885936 ~ 15886142 (+)
G1998628 NA other upstream 2467087 13222037 ~ 13222681 (+)
G1994851 NA other upstream 6123614 9560723 ~ 9566154 (+)
G1994757 LOC106613263 other upstream 6298835 9390568 ~ 9390933 (+)
G1993783 NA other upstream 6991645 8697174 ~ 8698123 (+)
G1993771 herc1 other upstream 7021501 8666601 ~ 8668267 (+)
G2002823 NA other downstream 375707 16071987 ~ 16074044 (+)
fshb LOC100136594 other downstream 916205 16609650 ~ 16614319 (+)
G2004946 LOC106587126 other downstream 2174279 17870559 ~ 17880793 (+)
G2006213 NA other downstream 3072853 18769133 ~ 18769500 (+)

Expression


Co-expression Network