Gene
RNA
| Item | Value |
|---|---|
| gene id | G2004400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 17212575 ~ 17212940 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2293416 | True | 366 | lncRNA | 0.36 | 1 | 17212575 | 17212940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506312 | LOC106561942 | coding | upstream | 41334 | 17166284 ~ 17171241 (+) |
| LOC110506311 | NA | coding | upstream | 47008 | 17161288 ~ 17165567 (+) |
| LOC110506305 | LOC106561936 | coding | upstream | 386995 | 16809933 ~ 16825580 (+) |
| LOC110506300 | LOC106561933 | coding | upstream | 467177 | 16662126 ~ 16745398 (+) |
| LOC110506299 | LOC106561932 | coding | upstream | 553860 | 16636089 ~ 16658715 (+) |
| LOC110506316 | LOC106561947 | coding | downstream | 79395 | 17292335 ~ 17457609 (+) |
| LOC110506321 | LOC106561954 | coding | downstream | 470384 | 17683324 ~ 17735109 (+) |
| LOC110506324 | LOC100380690 | coding | downstream | 528454 | 17741394 ~ 17754079 (+) |
| LOC110506331 | NA | coding | downstream | 587627 | 17800567 ~ 17807968 (+) |
| LOC110506330 | NA | coding | downstream | 602061 | 17815001 ~ 17816952 (+) |
| G2004355 | NA | non-coding | upstream | 84093 | 17127892 ~ 17128482 (+) |
| G2004354 | NA | non-coding | upstream | 85156 | 17126868 ~ 17127419 (+) |
| G2004352 | NA | non-coding | upstream | 86747 | 17119995 ~ 17125828 (+) |
| G2004350 | NA | non-coding | upstream | 93456 | 17118786 ~ 17119119 (+) |
| G2004344 | NA | non-coding | upstream | 100990 | 17109277 ~ 17111585 (+) |
| G2004433 | NA | non-coding | downstream | 43391 | 17256331 ~ 17257023 (+) |
| G2004434 | NA | non-coding | downstream | 45615 | 17258555 ~ 17258759 (+) |
| G2004435 | NA | non-coding | downstream | 47037 | 17259977 ~ 17260201 (+) |
| G2004437 | NA | non-coding | downstream | 51075 | 17264015 ~ 17264389 (+) |
| G2004438 | NA | non-coding | downstream | 51540 | 17264480 ~ 17264978 (+) |
| fshb | LOC100136594 | other | upstream | 598393 | 16609650 ~ 16614319 (+) |
| G2002823 | NA | other | upstream | 1138531 | 16071987 ~ 16074044 (+) |
| LOC110506284 | LOC106561914 | other | upstream | 1412502 | 15734525 ~ 15800073 (+) |
| G2002614 | NA | other | upstream | 1516295 | 15689768 ~ 15696280 (+) |
| G1998628 | NA | other | upstream | 3989894 | 13222037 ~ 13222681 (+) |
| G2004946 | LOC106587126 | other | downstream | 657619 | 17870559 ~ 17880793 (+) |
| G2006213 | NA | other | downstream | 1556193 | 18769133 ~ 18769500 (+) |
| LOC110506373 | LOC106562010 | other | downstream | 3266518 | 20479458 ~ 20482966 (+) |
| G2008616 | NA | other | downstream | 3500423 | 20713363 ~ 20713673 (+) |
| G2009636 | NA | other | downstream | 4400094 | 21613034 ~ 21613429 (+) |
