G2007683


Basic Information

Item Value
gene id G2007683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 19821866 ~ 19857787 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2296891
ATTATATTTAATCATCTCTCAAAATGGATCTCAAAAGTATTTATtgtacaaaacagaaataaaaaaTGCAAATCTGGAATTATGAAAAAAATTATGCATATCCAAAACAAGGAAAAACAGGGGTTAACAGCCTTATTTCAGTTAGAAacgacagttgaagtcggaagtttacatacacttagtatgcattgcctttaaattgttaattttagcccattcctcctgacagagctggtgtaacggagtcaggtttgtaggcctccttgctcgcacacactttttcagttctgcccacacattttctataggattgaggtcagggctttgtgttggccactccaataccttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccatgctttaacttcctgactgatgtcttgagatgttgcttcaatatatccacatcattttcttccacaaaatagatggcatcatgaggaagtgcACCAgtttctcctgcagcaaagcacccccacaacatgatgctgccaacccccaTGCTtctcggttgggatggtgttcttcggcttgtaagcctccccctttttcctctaaacataacaatggtcattatggccaaacagttctattttcagtttcatcggaccagaggacatttccccaaaaagtatgatctttgtccccacgtgcagttgcaaaccgtagtctggcttttttatggcggttttggagcagtggtttctaccttgctgagcagcctttaaggttatgtcgatataggacccgttttactgtggctatagatacttctgtaccggtttcctccagcatcttcacatggtcctttgctgttgttctgggattgattttcacttttcgcactgAAGTACTTTCATCTCAAGGAGACCGAACCCATCTCCTTCcggagtggtatgacggctgtgtggtcccatggtgtttatacttgtgtactattgtttgtacagatgaacgtggtaccttcaggtatttggatgaaccagacttgtggaggtctacaatttttgtttctgaggtcttggctgatttctttagattttcccatgatgtcaagcaaagaggcaatgagtttgaaggtaggccttgaaatacatcgacaggtacacctccaattgactcaaattaggtcaattagcctatcagaagcttcaaagccatgacatagttttctggaattttccaagctgtttaaagacggtaaacttagtgtatgtaatttcactggaattgtgatacagtgcattataagtgaaataatctaatccaacaattgttggaaaaattacttgtgtcgtgcacaaagtagatgtcctaaccgacttgccaaaaatatagtttgttaacaagaaatgtgtggagtggttgaaaaatgagttttaatgactccaacctaagtgtatgtaaacttccgacttcaactgtcgtTTCTAACTGAAATAAGGCTGTTAACCCCTGTTTTTCCTTGTTTTGGATATGCATAATTTTTTTCATAATTCCAGATTTGCAttttttatttctgttttgtacaATAAATACTTTTGAGATCCATTTTGAGAGATGATTAAATATAATTTGTCTGtaaacgcataAATGGTCTCTGAAGATGTATCCAGAGATTCAGTTTCATGCGATATGAATTTAATTTAATGATTGTACTTGTGGAAACTACTGAATCTAATGTTTTGCCATTTACCCAAACATCAGAAACTACAATGACACAGTTCAACAATAAACAGTCTACCATCTAATATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2296891 True 1832 lncRNA 0.39 3 19821866 19857787

Neighbor

gene id symbol gene type direction distance location
cdca9 LOC106562035 coding downstream 272 19818632 ~ 19821594 (-)
phkb phkb coding downstream 150270 19611688 ~ 19671596 (-)
adamts18 LOC106561991 coding downstream 285581 19483469 ~ 19536285 (-)
LOC110506226 NA coding downstream 479782 19328849 ~ 19342084 (-)
LOC110506352 LOC106561987 coding downstream 1403115 18406415 ~ 18418751 (-)
orc6 orc6 coding upstream 30907 19888694 ~ 19892061 (-)
hrh3 LOC106562003 coding upstream 50591 19908378 ~ 19910488 (-)
LOC110506369 LOC106562006 coding upstream 334873 20192660 ~ 20197141 (-)
LOC110506374 LOC106562011 coding upstream 624572 20482359 ~ 20486561 (-)
zgc:162297 LOC106562013 coding upstream 632162 20489949 ~ 20493240 (-)
G2007679 dnaja2 non-coding downstream 9383 19811646 ~ 19812483 (-)
G2007686 LOC107701234 non-coding downstream 35053 19782948 ~ 19786813 (-)
G2007717 NA non-coding downstream 51387 19769376 ~ 19770479 (-)
G2007702 NA non-coding downstream 84070 19736969 ~ 19737796 (-)
G2007670 NA non-coding downstream 109372 19712162 ~ 19712494 (-)
G2007763 NA non-coding upstream 16749 19874536 ~ 19874852 (-)
G2007764 LOC106562001 non-coding upstream 17946 19875733 ~ 19876017 (-)
G2007765 LOC106562001 non-coding upstream 18965 19876752 ~ 19877290 (-)
G2007770 NA non-coding upstream 24437 19882224 ~ 19883187 (-)
G2007768 NA non-coding upstream 30208 19887995 ~ 19888366 (-)
G2005584 NA other downstream 1587330 18234274 ~ 18234536 (-)
G2005456 LOC106561978 other downstream 1622277 18194110 ~ 18199589 (-)
G2005166 NA other downstream 1931785 17887445 ~ 17890081 (-)
G2003819 LOC106561933 other downstream 3098184 16720991 ~ 16723682 (-)
nav2a LOC106587075 other downstream 3862301 15900960 ~ 16211028 (-)
G2009991 NA other upstream 1776492 21634279 ~ 21634592 (-)
lto1 oraov1 other upstream 2545231 22402983 ~ 22405876 (-)
G2011712 LOC106587247 other upstream 3387997 23245784 ~ 23247139 (-)
G2012712 NA other upstream 4348493 24206280 ~ 24222078 (-)
LOC110506455 LOC106562138 other upstream 4638526 24486973 ~ 24599682 (-)

Expression


Co-expression Network