Gene
RNA
| Item | Value |
|---|---|
| gene id | G2007488 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 19868802 ~ 19869157 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109204916 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2296686 | True | 356 | lncRNA | 0.38 | 1 | 19868802 | 19869157 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506362 | LOC106587296 | coding | upstream | 21795 | 19840371 ~ 19847007 (+) |
| LOC110506360 | dnaja2 | coding | upstream | 53549 | 19810088 ~ 19815253 (+) |
| LOC110506357 | neto2 | coding | upstream | 59754 | 19791952 ~ 19809048 (+) |
| itfg1 | itfg1 | coding | upstream | 77424 | 19671648 ~ 19791378 (+) |
| LOC118944408 | NA | coding | upstream | 237788 | 19629161 ~ 19631075 (+) |
| vps35 | vps35 | coding | downstream | 23104 | 19892261 ~ 19907886 (+) |
| LOC110506368 | shcbp1 | coding | downstream | 53459 | 19922616 ~ 19946131 (+) |
| LOC118944432 | NA | coding | downstream | 327163 | 20196320 ~ 20207642 (+) |
| LOC110506370 | LOC106562009 | coding | downstream | 511205 | 20380362 ~ 20399831 (+) |
| LOC118944457 | NA | coding | downstream | 585524 | 20454681 ~ 20457347 (+) |
| G2007487 | NA | non-coding | upstream | 287 | 19868029 ~ 19868515 (+) |
| G2007422 | NA | non-coding | upstream | 80644 | 19732940 ~ 19788158 (+) |
| G2007425 | NA | non-coding | upstream | 129402 | 19737447 ~ 19739400 (+) |
| G2007356 | NA | non-coding | upstream | 256356 | 19586718 ~ 19612446 (+) |
| G2007492 | NA | non-coding | downstream | 2654 | 19871811 ~ 19872143 (+) |
| G2007493 | NA | non-coding | downstream | 9702 | 19878859 ~ 19879070 (+) |
| G2007496 | NA | non-coding | downstream | 16620 | 19885777 ~ 19885976 (+) |
| G2007497 | NA | non-coding | downstream | 16885 | 19886042 ~ 19886545 (+) |
| G2007449 | NA | non-coding | downstream | 47844 | 19917001 ~ 19917461 (+) |
| G2006213 | NA | other | upstream | 1099302 | 18769133 ~ 18769500 (+) |
| G2004946 | LOC106587126 | other | upstream | 1988009 | 17870559 ~ 17880793 (+) |
| fshb | LOC100136594 | other | upstream | 3254620 | 16609650 ~ 16614319 (+) |
| G2002823 | NA | other | upstream | 3794758 | 16071987 ~ 16074044 (+) |
| LOC110506284 | LOC106561914 | other | upstream | 4068729 | 15734525 ~ 15800073 (+) |
| LOC110506373 | LOC106562010 | other | downstream | 610301 | 20479458 ~ 20482966 (+) |
| G2008616 | NA | other | downstream | 844206 | 20713363 ~ 20713673 (+) |
| G2009636 | NA | other | downstream | 1743877 | 21613034 ~ 21613429 (+) |
| G2009769 | NA | other | downstream | 1968566 | 21837723 ~ 21838158 (+) |
| G2009770 | NA | other | downstream | 1969546 | 21838703 ~ 21839241 (+) |
