Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008397 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20442797 ~ 20443097 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2297647 | True | 301 | lncRNA | 0.45 | 1 | 20442797 | 20443097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506369 | LOC106562006 | coding | downstream | 245656 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 532309 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 550736 | 19888694 ~ 19892061 (-) |
| gpt2 | gpt2 | coding | downstream | 607657 | 19823963 ~ 19835140 (-) |
| cdca9 | LOC106562035 | coding | downstream | 621203 | 19818632 ~ 19821594 (-) |
| LOC110506374 | LOC106562011 | coding | upstream | 39262 | 20482359 ~ 20486561 (-) |
| zgc:162297 | LOC106562013 | coding | upstream | 46852 | 20489949 ~ 20493240 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 552162 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 758415 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 933338 | 21376435 ~ 21596616 (-) |
| G2008392 | NA | non-coding | downstream | 6303 | 20436158 ~ 20436494 (-) |
| G2008385 | NA | non-coding | downstream | 21194 | 20421389 ~ 20421603 (-) |
| G2008379 | NA | non-coding | downstream | 27188 | 20415370 ~ 20415609 (-) |
| G2008373 | NA | non-coding | downstream | 40521 | 20402038 ~ 20402276 (-) |
| G2008237 | NA | non-coding | downstream | 235078 | 20207383 ~ 20207719 (-) |
| G2008398 | NA | non-coding | upstream | 2210 | 20445307 ~ 20445549 (-) |
| G2008409 | NA | non-coding | upstream | 19018 | 20462115 ~ 20462514 (-) |
| G2008417 | NA | non-coding | upstream | 32507 | 20475604 ~ 20475870 (-) |
| G2008465 | NA | non-coding | upstream | 59630 | 20502727 ~ 20502969 (-) |
| G2008481 | NA | non-coding | upstream | 83993 | 20527090 ~ 20527852 (-) |
| G2005584 | NA | other | downstream | 2208261 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2243208 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2552716 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 3719115 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4483232 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 1191182 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1959921 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2802687 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3763183 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 4053216 | 24486973 ~ 24599682 (-) |
