Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008398 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20445307 ~ 20445549 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2297648 | True | 243 | lncRNA | 0.37 | 1 | 20445307 | 20445549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506369 | LOC106562006 | coding | downstream | 248166 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 534819 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 553246 | 19888694 ~ 19892061 (-) |
| gpt2 | gpt2 | coding | downstream | 610167 | 19823963 ~ 19835140 (-) |
| cdca9 | LOC106562035 | coding | downstream | 623713 | 19818632 ~ 19821594 (-) |
| LOC110506374 | LOC106562011 | coding | upstream | 36810 | 20482359 ~ 20486561 (-) |
| zgc:162297 | LOC106562013 | coding | upstream | 44400 | 20489949 ~ 20493240 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 549710 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 755963 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 930886 | 21376435 ~ 21596616 (-) |
| G2008397 | NA | non-coding | downstream | 2210 | 20442797 ~ 20443097 (-) |
| G2008392 | NA | non-coding | downstream | 8813 | 20436158 ~ 20436494 (-) |
| G2008385 | NA | non-coding | downstream | 23704 | 20421389 ~ 20421603 (-) |
| G2008379 | NA | non-coding | downstream | 29698 | 20415370 ~ 20415609 (-) |
| G2008373 | NA | non-coding | downstream | 43031 | 20402038 ~ 20402276 (-) |
| G2008409 | NA | non-coding | upstream | 16566 | 20462115 ~ 20462514 (-) |
| G2008417 | NA | non-coding | upstream | 30055 | 20475604 ~ 20475870 (-) |
| G2008465 | NA | non-coding | upstream | 57178 | 20502727 ~ 20502969 (-) |
| G2008481 | NA | non-coding | upstream | 81541 | 20527090 ~ 20527852 (-) |
| G2008482 | NA | non-coding | upstream | 82413 | 20527962 ~ 20528172 (-) |
| G2005584 | NA | other | downstream | 2210771 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2245718 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2555226 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 3721625 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4485742 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 1188730 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1957469 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2800235 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3760731 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 4050764 | 24486973 ~ 24599682 (-) |
