Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008482 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20527962 ~ 20528172 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2297737 | True | 211 | lncRNA | 0.36 | 1 | 20527962 | 20528172 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162297 | LOC106562013 | coding | downstream | 34722 | 20489949 ~ 20493240 (-) |
| LOC110506374 | LOC106562011 | coding | downstream | 41401 | 20482359 ~ 20486561 (-) |
| LOC110506369 | LOC106562006 | coding | downstream | 330821 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 617474 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 635901 | 19888694 ~ 19892061 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 467087 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 673340 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 848263 | 21376435 ~ 21596616 (-) |
| LOC118944445 | NA | coding | upstream | 1156214 | 21684386 ~ 21686159 (-) |
| mtss1lb | LOC106587150 | coding | upstream | 1163276 | 21691448 ~ 21759635 (-) |
| G2008481 | NA | non-coding | downstream | 110 | 20527090 ~ 20527852 (-) |
| G2008465 | NA | non-coding | downstream | 24993 | 20502727 ~ 20502969 (-) |
| G2008417 | NA | non-coding | downstream | 52092 | 20475604 ~ 20475870 (-) |
| G2008409 | NA | non-coding | downstream | 65448 | 20462115 ~ 20462514 (-) |
| G2008398 | NA | non-coding | downstream | 82413 | 20445307 ~ 20445549 (-) |
| G2008490 | NA | non-coding | upstream | 22235 | 20550407 ~ 20550652 (-) |
| G2008498 | NA | non-coding | upstream | 28019 | 20556191 ~ 20556469 (-) |
| G2008501 | NA | non-coding | upstream | 29613 | 20557785 ~ 20557991 (-) |
| G2008515 | NA | non-coding | upstream | 44074 | 20572246 ~ 20572469 (-) |
| G2008520 | yo84 | non-coding | upstream | 46258 | 20574430 ~ 20574651 (-) |
| G2005584 | NA | other | downstream | 2293426 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2328373 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2637881 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 3804280 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4568397 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 1106107 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1874846 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2717612 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3678108 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 3968141 | 24486973 ~ 24599682 (-) |
