Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008490 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20550407 ~ 20550652 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2297745 | True | 246 | lncRNA | 0.45 | 1 | 20550407 | 20550652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162297 | LOC106562013 | coding | downstream | 57167 | 20489949 ~ 20493240 (-) |
| LOC110506374 | LOC106562011 | coding | downstream | 63846 | 20482359 ~ 20486561 (-) |
| LOC110506369 | LOC106562006 | coding | downstream | 353266 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 639919 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 658346 | 19888694 ~ 19892061 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 444607 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 650860 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 825783 | 21376435 ~ 21596616 (-) |
| LOC118944445 | NA | coding | upstream | 1133734 | 21684386 ~ 21686159 (-) |
| mtss1lb | LOC106587150 | coding | upstream | 1140796 | 21691448 ~ 21759635 (-) |
| G2008482 | NA | non-coding | downstream | 22235 | 20527962 ~ 20528172 (-) |
| G2008481 | NA | non-coding | downstream | 22555 | 20527090 ~ 20527852 (-) |
| G2008465 | NA | non-coding | downstream | 47438 | 20502727 ~ 20502969 (-) |
| G2008417 | NA | non-coding | downstream | 74537 | 20475604 ~ 20475870 (-) |
| G2008409 | NA | non-coding | downstream | 87893 | 20462115 ~ 20462514 (-) |
| G2008498 | NA | non-coding | upstream | 5539 | 20556191 ~ 20556469 (-) |
| G2008501 | NA | non-coding | upstream | 7133 | 20557785 ~ 20557991 (-) |
| G2008515 | NA | non-coding | upstream | 21594 | 20572246 ~ 20572469 (-) |
| G2008520 | yo84 | non-coding | upstream | 23778 | 20574430 ~ 20574651 (-) |
| G2008522 | NA | non-coding | upstream | 24615 | 20575267 ~ 20575486 (-) |
| G2005584 | NA | other | downstream | 2315871 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2350818 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2660326 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 3826725 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4590842 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 1083627 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1852366 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2695132 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3655628 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 3945661 | 24486973 ~ 24599682 (-) |
