G2008498



Basic Information


Item Value
gene id G2008498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 20556191 ~ 20556469 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2297753
ATATATTTGAGTTCAACCATAACATTTGTTGAAATATTTCTTCtatcttttctggaggataaaactgaaattgtaaccagctttTGTATGGCTTCTTTAAGAAAGGGCGATACTTTAAACAACATTTAATTTTCAATTAGTCGGAAATGAGAAGTTATTAGAATCTATATGAAGGCAAAAAAGCCATTTTGaacaaaaatgagcttttcttaataatctactggagaaccgttttgggtttaagtataacttatgtatgagtgaagcttttagtgagag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2297753 True 279 lncRNA 0.30 1 20556191 20556469

Neighbor


gene id symbol gene type direction distance location
zgc:162297 LOC106562013 coding downstream 62951 20489949 ~ 20493240 (-)
LOC110506374 LOC106562011 coding downstream 69630 20482359 ~ 20486561 (-)
LOC110506369 LOC106562006 coding downstream 359050 20192660 ~ 20197141 (-)
hrh3 LOC106562003 coding downstream 645703 19908378 ~ 19910488 (-)
orc6 orc6 coding downstream 664130 19888694 ~ 19892061 (-)
LOC110506379 LOC106562036 coding upstream 438790 20995259 ~ 21033710 (-)
LOC118944467 NA coding upstream 645043 21201512 ~ 21203697 (-)
si:ch211-186j3.6 LOC106562040 coding upstream 819966 21376435 ~ 21596616 (-)
LOC118944445 NA coding upstream 1127917 21684386 ~ 21686159 (-)
mtss1lb LOC106587150 coding upstream 1134979 21691448 ~ 21759635 (-)
G2008490 NA non-coding downstream 5539 20550407 ~ 20550652 (-)
G2008482 NA non-coding downstream 28019 20527962 ~ 20528172 (-)
G2008481 NA non-coding downstream 28339 20527090 ~ 20527852 (-)
G2008465 NA non-coding downstream 53222 20502727 ~ 20502969 (-)
G2008417 NA non-coding downstream 80321 20475604 ~ 20475870 (-)
G2008501 NA non-coding upstream 1316 20557785 ~ 20557991 (-)
G2008515 NA non-coding upstream 15777 20572246 ~ 20572469 (-)
G2008520 yo84 non-coding upstream 17961 20574430 ~ 20574651 (-)
G2008522 NA non-coding upstream 18798 20575267 ~ 20575486 (-)
G2008739 NA non-coding upstream 52868 20609337 ~ 20609574 (-)
G2005584 NA other downstream 2321655 18234274 ~ 18234536 (-)
G2005456 LOC106561978 other downstream 2356602 18194110 ~ 18199589 (-)
G2005166 NA other downstream 2666110 17887445 ~ 17890081 (-)
G2003819 LOC106561933 other downstream 3832509 16720991 ~ 16723682 (-)
nav2a LOC106587075 other downstream 4596626 15900960 ~ 16211028 (-)
G2009991 NA other upstream 1077810 21634279 ~ 21634592 (-)
lto1 oraov1 other upstream 1846549 22402983 ~ 22405876 (-)
G2011712 LOC106587247 other upstream 2689315 23245784 ~ 23247139 (-)
G2012712 NA other upstream 3649811 24206280 ~ 24222078 (-)
LOC110506455 LOC106562138 other upstream 3939844 24486973 ~ 24599682 (-)

Expression



Co-expression Network