Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008792 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20712941 ~ 20713190 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2298079 | True | 250 | lncRNA | 0.42 | 1 | 20712941 | 20713190 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162297 | LOC106562013 | coding | downstream | 219701 | 20489949 ~ 20493240 (-) |
| LOC110506374 | LOC106562011 | coding | downstream | 226380 | 20482359 ~ 20486561 (-) |
| LOC110506369 | LOC106562006 | coding | downstream | 515800 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 802453 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 820880 | 19888694 ~ 19892061 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 282069 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 488322 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 663245 | 21376435 ~ 21596616 (-) |
| LOC118944445 | NA | coding | upstream | 971196 | 21684386 ~ 21686159 (-) |
| mtss1lb | LOC106587150 | coding | upstream | 978258 | 21691448 ~ 21759635 (-) |
| G2008739 | NA | non-coding | downstream | 103367 | 20609337 ~ 20609574 (-) |
| G2008522 | NA | non-coding | downstream | 137455 | 20575267 ~ 20575486 (-) |
| G2008520 | yo84 | non-coding | downstream | 138290 | 20574430 ~ 20574651 (-) |
| G2008515 | NA | non-coding | downstream | 140472 | 20572246 ~ 20572469 (-) |
| G2008501 | NA | non-coding | downstream | 154950 | 20557785 ~ 20557991 (-) |
| G2008794 | NA | non-coding | upstream | 4804 | 20717994 ~ 20718285 (-) |
| G2008799 | NA | non-coding | upstream | 14424 | 20727614 ~ 20727815 (-) |
| G2008817 | NA | non-coding | upstream | 70289 | 20783479 ~ 20874065 (-) |
| G2008855 | NA | non-coding | upstream | 108243 | 20821433 ~ 20822269 (-) |
| G2008889 | NA | non-coding | upstream | 162078 | 20875268 ~ 20875520 (-) |
| G2005584 | NA | other | downstream | 2478405 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2513352 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2822860 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 3989259 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4753376 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 921089 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1689828 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2532594 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3493090 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 3783123 | 24486973 ~ 24599682 (-) |
