Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008817 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20783479 ~ 20874065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2298107 | True | 290 | lncRNA | 0.42 | 3 | 20783479 | 20874065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162297 | LOC106562013 | coding | downstream | 290239 | 20489949 ~ 20493240 (-) |
| LOC110506374 | LOC106562011 | coding | downstream | 296918 | 20482359 ~ 20486561 (-) |
| LOC110506369 | LOC106562006 | coding | downstream | 586338 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 872991 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 891418 | 19888694 ~ 19892061 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 121194 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 327447 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 502370 | 21376435 ~ 21596616 (-) |
| LOC118944445 | NA | coding | upstream | 810321 | 21684386 ~ 21686159 (-) |
| mtss1lb | LOC106587150 | coding | upstream | 817383 | 21691448 ~ 21759635 (-) |
| G2008799 | NA | non-coding | downstream | 55664 | 20727614 ~ 20727815 (-) |
| G2008794 | NA | non-coding | downstream | 65194 | 20717994 ~ 20718285 (-) |
| G2008792 | NA | non-coding | downstream | 70289 | 20712941 ~ 20713190 (-) |
| G2008739 | NA | non-coding | downstream | 173905 | 20609337 ~ 20609574 (-) |
| G2008522 | NA | non-coding | downstream | 207993 | 20575267 ~ 20575486 (-) |
| G2008889 | NA | non-coding | upstream | 1203 | 20875268 ~ 20875520 (-) |
| G2009005 | LOC106579309 | non-coding | upstream | 68606 | 20942671 ~ 20942887 (-) |
| G2009026 | NA | non-coding | upstream | 80853 | 20954918 ~ 20955523 (-) |
| G2009025 | NA | non-coding | upstream | 81755 | 20955820 ~ 20956478 (-) |
| G2009027 | NA | non-coding | upstream | 83393 | 20957458 ~ 20958763 (-) |
| G2005584 | NA | other | downstream | 2548943 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2583890 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2893398 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 4059797 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4823914 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 760214 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1528953 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2371719 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3332215 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 3622248 | 24486973 ~ 24599682 (-) |
