Gene
RNA
| Item | Value |
|---|---|
| gene id | G2008889 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 20875268 ~ 20875520 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2298181 | True | 253 | lncRNA | 0.39 | 1 | 20875268 | 20875520 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:162297 | LOC106562013 | coding | downstream | 382028 | 20489949 ~ 20493240 (-) |
| LOC110506374 | LOC106562011 | coding | downstream | 388707 | 20482359 ~ 20486561 (-) |
| LOC110506369 | LOC106562006 | coding | downstream | 678127 | 20192660 ~ 20197141 (-) |
| hrh3 | LOC106562003 | coding | downstream | 964780 | 19908378 ~ 19910488 (-) |
| orc6 | orc6 | coding | downstream | 983207 | 19888694 ~ 19892061 (-) |
| LOC110506379 | LOC106562036 | coding | upstream | 119739 | 20995259 ~ 21033710 (-) |
| LOC118944467 | NA | coding | upstream | 325992 | 21201512 ~ 21203697 (-) |
| si:ch211-186j3.6 | LOC106562040 | coding | upstream | 500915 | 21376435 ~ 21596616 (-) |
| LOC118944445 | NA | coding | upstream | 808866 | 21684386 ~ 21686159 (-) |
| mtss1lb | LOC106587150 | coding | upstream | 815928 | 21691448 ~ 21759635 (-) |
| G2008817 | NA | non-coding | downstream | 1203 | 20783479 ~ 20874065 (-) |
| G2008855 | NA | non-coding | downstream | 52999 | 20821433 ~ 20822269 (-) |
| G2008799 | NA | non-coding | downstream | 147453 | 20727614 ~ 20727815 (-) |
| G2008794 | NA | non-coding | downstream | 156983 | 20717994 ~ 20718285 (-) |
| G2008792 | NA | non-coding | downstream | 162078 | 20712941 ~ 20713190 (-) |
| G2009005 | LOC106579309 | non-coding | upstream | 67151 | 20942671 ~ 20942887 (-) |
| G2009026 | NA | non-coding | upstream | 79398 | 20954918 ~ 20955523 (-) |
| G2009025 | NA | non-coding | upstream | 80300 | 20955820 ~ 20956478 (-) |
| G2009027 | NA | non-coding | upstream | 81938 | 20957458 ~ 20958763 (-) |
| G2009031 | NA | non-coding | upstream | 87122 | 20962642 ~ 20962953 (-) |
| G2005584 | NA | other | downstream | 2640732 | 18234274 ~ 18234536 (-) |
| G2005456 | LOC106561978 | other | downstream | 2675679 | 18194110 ~ 18199589 (-) |
| G2005166 | NA | other | downstream | 2985187 | 17887445 ~ 17890081 (-) |
| G2003819 | LOC106561933 | other | downstream | 4151586 | 16720991 ~ 16723682 (-) |
| nav2a | LOC106587075 | other | downstream | 4915703 | 15900960 ~ 16211028 (-) |
| G2009991 | NA | other | upstream | 758759 | 21634279 ~ 21634592 (-) |
| lto1 | oraov1 | other | upstream | 1527498 | 22402983 ~ 22405876 (-) |
| G2011712 | LOC106587247 | other | upstream | 2370264 | 23245784 ~ 23247139 (-) |
| G2012712 | NA | other | upstream | 3330760 | 24206280 ~ 24222078 (-) |
| LOC110506455 | LOC106562138 | other | upstream | 3620793 | 24486973 ~ 24599682 (-) |
