Gene
RNA
| Item | Value |
|---|---|
| gene id | G2011735 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 23298522 ~ 23304215 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: glutamate receptor ionotropic, delta-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2301268 | True | 401 | lncRNA | 0.46 | 2 | 23298522 | 23304215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506436 | NA | coding | upstream | 26577 | 23268093 ~ 23271945 (+) |
| LOC110506433 | LOC106587247 | coding | upstream | 31720 | 23180806 ~ 23266802 (+) |
| LOC110506431 | LOC106562156 | coding | upstream | 121313 | 23175882 ~ 23177209 (+) |
| pkd1l3 | LOC106587158 | coding | upstream | 144616 | 23147547 ~ 23153906 (+) |
| LOC118944393 | LOC106562175 | coding | upstream | 151618 | 23143221 ~ 23146904 (+) |
| LOC110506437 | LOC106562151 | coding | downstream | 15866 | 23320081 ~ 23473212 (+) |
| LOC110506438 | LOC106587243 | coding | downstream | 169991 | 23474206 ~ 23648203 (+) |
| LOC110506439 | casc4 | coding | downstream | 344855 | 23649070 ~ 23680333 (+) |
| LOC110506441 | LOC106562148 | coding | downstream | 376669 | 23680884 ~ 23706352 (+) |
| LOC110506442 | LOC106587240 | coding | downstream | 411815 | 23716030 ~ 23721956 (+) |
| G2010923 | NA | non-coding | upstream | 33332 | 23264967 ~ 23265190 (+) |
| G2010922 | NA | non-coding | upstream | 35001 | 23263066 ~ 23263521 (+) |
| G2010921 | NA | non-coding | upstream | 43005 | 23255225 ~ 23255517 (+) |
| G2010920 | NA | non-coding | upstream | 43546 | 23254568 ~ 23254976 (+) |
| G2011798 | NA | non-coding | downstream | 117953 | 23422168 ~ 23422430 (+) |
| G2011729 | NA | non-coding | downstream | 125297 | 23429512 ~ 23430382 (+) |
| G2011804 | NA | non-coding | downstream | 143448 | 23447663 ~ 23448402 (+) |
| G2011853 | NA | non-coding | downstream | 222074 | 23526289 ~ 23526509 (+) |
| G2011854 | NA | non-coding | downstream | 222656 | 23526871 ~ 23527131 (+) |
| G2010795 | NA | other | upstream | 236846 | 23061179 ~ 23061676 (+) |
| G2010496 | NA | other | upstream | 855086 | 22443118 ~ 22443436 (+) |
| G2010267 | NA | other | upstream | 1231281 | 22058096 ~ 22067241 (+) |
| G2009770 | NA | other | upstream | 1459281 | 21838703 ~ 21839241 (+) |
| G2009769 | NA | other | upstream | 1460364 | 21837723 ~ 21838158 (+) |
| G2011803 | NA | other | downstream | 143046 | 23447261 ~ 23512801 (+) |
| G2012007 | NA | other | downstream | 578987 | 23883202 ~ 23886340 (+) |
| LOC110506448 | NA | other | downstream | 726759 | 24030968 ~ 24037129 (+) |
| G2012820 | NA | other | downstream | 1026160 | 24330375 ~ 24330718 (+) |
| LOC110506460 | LOC106562133 | other | downstream | 1413519 | 24717649 ~ 24729611 (+) |
