G2011729


Basic Information

Item Value
gene id G2011729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 23429512 ~ 23430382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2301260
AACAAGAACAGGTGGAATACGGGAGAGTGACATCATCCCCAACTAGAACAGGTAgaatacaggagagagacatcatcCCCAACAAGAACAGGTGGAATACGGGAGAGTGACATCATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAATAGGTAGAATACAGGAGAGATGCATCATCCCCAACAAGAACAGGTGGAATACGGGAGAGTGACATCATCCCCAACAAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTGGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGCATTATCCCCAACTAGAACAGGTAGAATACAGGAGAGATGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2301260 True 551 lncRNA 0.44 2 23429512 23430382
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110506436 NA coding upstream 157567 23268093 ~ 23271945 (+)
LOC110506433 LOC106587247 coding upstream 162710 23180806 ~ 23266802 (+)
LOC110506431 LOC106562156 coding upstream 252303 23175882 ~ 23177209 (+)
pkd1l3 LOC106587158 coding upstream 275606 23147547 ~ 23153906 (+)
LOC118944393 LOC106562175 coding upstream 282608 23143221 ~ 23146904 (+)
LOC110506438 LOC106587243 coding downstream 43824 23474206 ~ 23648203 (+)
LOC110506439 casc4 coding downstream 218688 23649070 ~ 23680333 (+)
LOC110506441 LOC106562148 coding downstream 250502 23680884 ~ 23706352 (+)
LOC110506442 LOC106587240 coding downstream 285648 23716030 ~ 23721956 (+)
LOC110506444 eif3j coding downstream 294036 23724418 ~ 23728853 (+)
G2011798 NA non-coding upstream 7082 23422168 ~ 23422430 (+)
G2011735 NA non-coding upstream 125297 23298522 ~ 23304215 (+)
G2010923 NA non-coding upstream 164322 23264967 ~ 23265190 (+)
G2010922 NA non-coding upstream 165991 23263066 ~ 23263521 (+)
G2011804 NA non-coding downstream 17281 23447663 ~ 23448402 (+)
G2011853 NA non-coding downstream 95907 23526289 ~ 23526509 (+)
G2011854 NA non-coding downstream 96489 23526871 ~ 23527131 (+)
G2011870 NA non-coding downstream 122056 23552438 ~ 23552694 (+)
G2011872 NA non-coding downstream 123699 23554081 ~ 23554428 (+)
G2010795 NA other upstream 367836 23061179 ~ 23061676 (+)
G2010496 NA other upstream 986076 22443118 ~ 22443436 (+)
G2010267 NA other upstream 1362271 22058096 ~ 22067241 (+)
G2009770 NA other upstream 1590271 21838703 ~ 21839241 (+)
G2009769 NA other upstream 1591354 21837723 ~ 21838158 (+)
G2011803 NA other downstream 16879 23447261 ~ 23512801 (+)
G2012007 NA other downstream 452820 23883202 ~ 23886340 (+)
LOC110506448 NA other downstream 600592 24030968 ~ 24037129 (+)
G2012820 NA other downstream 899993 24330375 ~ 24330718 (+)
LOC110506460 LOC106562133 other downstream 1287352 24717649 ~ 24729611 (+)

Expression

G2011729 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G2011729 Expression in each Bioproject

Bar chart with 17 bars.
G2011729 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network