Gene
RNA
| Item | Value |
|---|---|
| gene id | G2015668 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 26601779 ~ 26602259 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2305583 | True | 348 | TUCP | 0.59 | 2 | 26601779 | 26602259 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psmd7 | LOC106587187 | coding | downstream | 259856 | 26336554 ~ 26341923 (-) |
| LOC110506506 | LOC101448035 | coding | downstream | 313092 | 26280732 ~ 26288687 (-) |
| bola3 | bola3 | coding | downstream | 324948 | 26272579 ~ 26276831 (-) |
| LOC110506505 | LOC106562097 | coding | downstream | 332579 | 26238635 ~ 26269200 (-) |
| clec3a | LOC106562113 | coding | downstream | 366756 | 26233109 ~ 26235023 (-) |
| LOC110506517 | LOC106562084 | coding | upstream | 23914 | 26626173 ~ 26907118 (-) |
| LOC110506519 | zfhx3 | coding | upstream | 331579 | 26933838 ~ 27127646 (-) |
| LOC118944563 | NA | coding | upstream | 586058 | 27188317 ~ 27189379 (-) |
| LOC118944564 | NA | coding | upstream | 668189 | 27270448 ~ 27276437 (-) |
| LOC118944565 | NA | coding | upstream | 742228 | 27344487 ~ 27349649 (-) |
| G2015662 | NA | non-coding | downstream | 7149 | 26594060 ~ 26594630 (-) |
| G2015651 | NA | non-coding | downstream | 22983 | 26578569 ~ 26578796 (-) |
| G2015447 | NA | non-coding | downstream | 65567 | 26531288 ~ 26536212 (-) |
| G2015446 | NA | non-coding | downstream | 67600 | 26529118 ~ 26534179 (-) |
| G2015445 | NA | non-coding | downstream | 69109 | 26522946 ~ 26532670 (-) |
| G2015680 | NA | non-coding | upstream | 13666 | 26615925 ~ 26618166 (-) |
| G2015694 | NA | non-coding | upstream | 29973 | 26632232 ~ 26632437 (-) |
| G2015695 | NA | non-coding | upstream | 30693 | 26632952 ~ 26633228 (-) |
| G2015696 | NA | non-coding | upstream | 32158 | 26634417 ~ 26634789 (-) |
| G2014702 | LOC106562103 | other | downstream | 871399 | 25727652 ~ 25730380 (-) |
| LOC110506491 | LOC106562111 | other | downstream | 920881 | 25675687 ~ 25681379 (-) |
| G2013483 | NA | other | downstream | 1751143 | 24850270 ~ 24850636 (-) |
| LOC110506455 | LOC106562138 | other | downstream | 2104971 | 24486973 ~ 24599682 (-) |
| G2015718 | NA | other | upstream | 83090 | 26685349 ~ 26735236 (-) |
| G2015737 | NA | other | upstream | 176480 | 26778739 ~ 26784661 (-) |
| G2016013 | NA | other | upstream | 483671 | 27085930 ~ 27086265 (-) |
| G2017021 | NA | other | upstream | 1475638 | 28077897 ~ 28078556 (-) |
| polr2m | NA | other | upstream | 1570584 | 28171095 ~ 28173731 (-) |
