G2015680


Basic Information

Item Value
gene id G2015680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 26615925 ~ 26618166 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2305595
TTATTTTCAGTTCCCAAAAGTAGTCAAGTTAAAAATTATATTTGCAAATCATGGGCTGGTGTTACCAGAGCCTAATTTCACATCACAAAACAGAATCACTGACCACCAACAAGACAATATAGTCTGTACAAAACTATACAAAGTCTAGTACAGAGAATGAATGACTTCAGAATCAAGTCCACCGCTTGGAACTTGCTGAACCTGACTACTCAAGTGCAGGACATATCAGTCTGGGGTCCTGGGGCCCCCCAGGTGCACGTTtgggtttttgccctagcactacacagctgattcaaaACATAATGATATCTGGGATCATTCACCCACTTGACTTGGAGAGGGGAATCTCAAGATAAAAATTGGTGGGCATTTTTAACACAAGGATCATGATGCTGAGGCCGTCATGCGTTTCATCCAGGTTCTGACATTCATGTGTAAACGGTGAGAAGCTGAGGAATATtctactctttaaaaaaaaaaaaaaacttttttaagtgaactaggcaagtcagttaagaacattcttatttacaattactgcctaccttgttcaggggcagaacaacaggtttttaccttgtcagctccgggattcgatctagcaatctttcggttactggcccaacgctctaaccacatgGCTACCTGCTGCTGTCAGTGCTTTGAAGGGCTAATGGGGTTAGGAAAAGCTCAGTTGCTAAAGCTTGTCCTCCAAACAGTTTGCATGAAGGGTGTTGTTAAGGTAGCTCCAGATATAAGGTCTGAGACACTCATGCCACAAGCACAGTTTGGATAATGCTTCAGTCAGTGAAGGGGCACTTCACCATGGCACAGGCCATTTGCTACACACAACATACAAATGATACAGAGGTCAGCCAGTTGTACAATGTGAAAATTATCTCTTGAAGGAGATTTGAGAGGGACATGATGAAATTGAAAAATAACTAAAGAAAATTGGGCAGAATTCATGAACACACGACACAGTACTacttctgcctcctctctctactcacaCTGAATGACATACAGCCCAATGAACACACTATGGGATCAGACTAGTTTGGACCAGCTGTCCACTTATGACTGACAGCACAATGCAGCACTACTTAAACACtagtaatggggggggggggggggggggggtctatacaGTTACATATCAGGATATATTGTTTTGACAATATCgcactagttggctgtacctgcacaaacgccagtatttttccttcatatcTTGTTCTCCGTCTTCTTTTGTATTCagaacttttatttccatgactgatcaaaactcatttCTCATGGATCTCGCTTGTCACTCTGCAGAagatatggtgagcaatatgtttggaacatcaactcaatcacagtatcgaatcgcaatacataatCATGATAATCGCAATACACATCGTATCGGCACCAAAGTACCATgctaatatcgtatcgtgaggtccctggcaattcccagccctattgaacacagtttatatTGATCGGGAGAGACTACATCAAGAAAACAGCCCCTTGTAGGGTACAGCAGGAGATGGAACAAAACATTTCCCGCTTGGACACTGTAGCTAGTGAACGATTATGATAAAGGCTTTGACAGATTTAAGGTATATCAAATACTCCTTAAAGACGATACCTTTTCAATGATGTTTCAtcattgtgtttatatttttttacaatcacagaaatagaaaatactGCATTCTAACAGCCGTACATCTCTGCACATAAAAATGGAACGATGCTATGTGGATTTGCTGACAGAAAAGGTATTTTACGGGAGCCTCATGCCTTATACAAGTTCTACCTCTGCTGGCCTCTGTCTGAACTGCGGCTGGTTCCAGACAATAGGAAGGGACAGTGTTccaaggcctctcagcaaggctCTTCCAGTGATGGTATGGTACACATACAGGTGATATTTAGTGGGAAGTTCAAGTGTTTAACTTTTAACAGAGAAGTACTAGAGCCCAAAACGAGCTGGGGTGCGCTTTGGGGTCATGGgtgcctcctccttccttcctggGGTGCAG

Function

NR:

description
PREDICTED: oligosaccharyltransferase complex subunit ostc isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2305595 True 2042 lncRNA 0.42 3 26615925 26618166
Loading

Neighbor

gene id symbol gene type direction distance location
psmd7 LOC106587187 coding downstream 274002 26336554 ~ 26341923 (-)
LOC110506506 LOC101448035 coding downstream 327238 26280732 ~ 26288687 (-)
bola3 bola3 coding downstream 339094 26272579 ~ 26276831 (-)
LOC110506505 LOC106562097 coding downstream 346725 26238635 ~ 26269200 (-)
clec3a LOC106562113 coding downstream 380902 26233109 ~ 26235023 (-)
LOC110506517 LOC106562084 coding upstream 8007 26626173 ~ 26907118 (-)
LOC110506519 zfhx3 coding upstream 315672 26933838 ~ 27127646 (-)
LOC118944563 NA coding upstream 570151 27188317 ~ 27189379 (-)
LOC118944564 NA coding upstream 652282 27270448 ~ 27276437 (-)
LOC118944565 NA coding upstream 726321 27344487 ~ 27349649 (-)
G2015662 NA non-coding downstream 21295 26594060 ~ 26594630 (-)
G2015651 NA non-coding downstream 37129 26578569 ~ 26578796 (-)
G2015447 NA non-coding downstream 79713 26531288 ~ 26536212 (-)
G2015446 NA non-coding downstream 81746 26529118 ~ 26534179 (-)
G2015445 NA non-coding downstream 83255 26522946 ~ 26532670 (-)
G2015694 NA non-coding upstream 14066 26632232 ~ 26632437 (-)
G2015695 NA non-coding upstream 14786 26632952 ~ 26633228 (-)
G2015696 NA non-coding upstream 16251 26634417 ~ 26634789 (-)
G2015700 NA non-coding upstream 23929 26642095 ~ 26642330 (-)
G2015668 NA other downstream 13666 26601779 ~ 26602259 (-)
G2014702 LOC106562103 other downstream 885545 25727652 ~ 25730380 (-)
LOC110506491 LOC106562111 other downstream 935027 25675687 ~ 25681379 (-)
G2013483 NA other downstream 1765289 24850270 ~ 24850636 (-)
G2015718 NA other upstream 67183 26685349 ~ 26735236 (-)
G2015737 NA other upstream 160573 26778739 ~ 26784661 (-)
G2016013 NA other upstream 467764 27085930 ~ 27086265 (-)
G2017021 NA other upstream 1459731 28077897 ~ 28078556 (-)
polr2m NA other upstream 1554677 28171095 ~ 28173731 (-)

Expression

G2015680 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 6.
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G2015680 Expression in each Bioproject

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G2015680 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network