Gene
RNA
| Item | Value |
|---|---|
| gene id | G2018128 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 28889378 ~ 28889593 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2308343 | True | 216 | lncRNA | 0.38 | 1 | 28889378 | 28889593 |
28,887,600
28,888,000
28,888,400
28,888,800
28,889,200
28,889,600
28,890,000
28,890,400
28,890,800
28,891,200
28,891,600
28,892,000
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506105 | LOC106562257 | coding | downstream | 593 | 28882890 ~ 28888785 (-) |
| LOC110506572 | LOC106562237 | coding | downstream | 15617 | 28862758 ~ 28873761 (-) |
| gfod2 | LOC106562235 | coding | downstream | 40354 | 28839979 ~ 28849024 (-) |
| LOC110506569 | LOC106562236 | coding | downstream | 50187 | 28835976 ~ 28839191 (-) |
| vrk3 | vrk3 | coding | downstream | 65161 | 28816797 ~ 28824217 (-) |
| si:ch211-122f10.4 | LOC106562245 | coding | upstream | 118755 | 29008348 ~ 29013729 (-) |
| LOC118944416 | LOC106562261 | coding | upstream | 150638 | 29038425 ~ 29045501 (-) |
| LOC110506106 | NA | coding | upstream | 179940 | 29069533 ~ 29073469 (-) |
| LOC110506588 | NA | coding | upstream | 416738 | 29306331 ~ 29322668 (-) |
| LOC110506590 | LOC106562252 | coding | upstream | 443967 | 29333560 ~ 29348036 (-) |
| G2018057 | LOC106562238 | non-coding | downstream | 13609 | 28874080 ~ 28875769 (-) |
| G2018118 | NA | non-coding | downstream | 30507 | 28855354 ~ 28858871 (-) |
| G2018119 | NA | non-coding | downstream | 34186 | 28851889 ~ 28855192 (-) |
| G2018061 | NA | non-coding | downstream | 44297 | 28787065 ~ 28845081 (-) |
| G2018059 | NA | non-coding | downstream | 84483 | 28722587 ~ 28804895 (-) |
| G2018134 | NA | non-coding | upstream | 11400 | 28900993 ~ 28901253 (-) |
| G2018140 | cmtr2 | non-coding | upstream | 23890 | 28913483 ~ 28914789 (-) |
| G2018165 | NA | non-coding | upstream | 61260 | 28950853 ~ 28951068 (-) |
| G2018168 | NA | non-coding | upstream | 62610 | 28952203 ~ 28953872 (-) |
| G2018186 | LOC106562243 | non-coding | upstream | 96821 | 28986414 ~ 28989673 (-) |
| G2018044 | rsl24d1 | other | downstream | 176925 | 28708904 ~ 28712453 (-) |
| polr2m | NA | other | downstream | 715802 | 28171095 ~ 28173731 (-) |
| G2017021 | NA | other | downstream | 810822 | 28077897 ~ 28078556 (-) |
| G2016013 | NA | other | downstream | 1803113 | 27085930 ~ 27086265 (-) |
| G2015737 | NA | other | downstream | 2104717 | 26778739 ~ 26784661 (-) |
| G2018139 | cmtr2 | other | upstream | 25369 | 28914962 ~ 28917197 (-) |
| G2018367 | NA | other | upstream | 401042 | 29290635 ~ 29291601 (-) |
| G2018415 | NA | other | upstream | 496465 | 29386058 ~ 29386388 (-) |
| G2018508 | NA | other | upstream | 640313 | 29529906 ~ 29530613 (-) |
| LOC110506621 | LOC106562298 | other | upstream | 1704206 | 30556981 ~ 30604748 (-) |
