Gene
RNA
| Item | Value |
|---|---|
| gene id | G2017668 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 29440380 ~ 29440627 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2307791 | True | 248 | lncRNA | 0.45 | 1 | 29440380 | 29440627 |
29,438,400
29,438,800
29,439,200
29,439,600
29,440,000
29,440,400
29,440,800
29,441,200
29,441,600
29,442,000
29,442,400
29,442,800
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506591 | LOC106562265 | coding | upstream | 12090 | 29403452 ~ 29428290 (+) |
| trnar-acg-113 | NA | coding | upstream | 109468 | 29330840 ~ 29330912 (+) |
| trnar-acg-112 | NA | coding | upstream | 110029 | 29330279 ~ 29330351 (+) |
| trnar-acg-111 | NA | coding | upstream | 111638 | 29328670 ~ 29328742 (+) |
| LOC118944409 | NA | coding | upstream | 120828 | 29313261 ~ 29319777 (+) |
| LOC110506592 | LOC106587383 | coding | downstream | 26937 | 29467564 ~ 29536864 (+) |
| uraha | LOC106562276 | coding | downstream | 97357 | 29537984 ~ 29540755 (+) |
| LOC110506595 | pdcd5 | coding | downstream | 100258 | 29540885 ~ 29551185 (+) |
| LOC110506596 | LOC106562275 | coding | downstream | 110912 | 29551539 ~ 29555425 (+) |
| p22-phox | p22-phox | coding | downstream | 119448 | 29560075 ~ 29562083 (+) |
| G2017666 | NA | non-coding | upstream | 1720 | 29438459 ~ 29438660 (+) |
| G2017632 | NA | non-coding | upstream | 58872 | 29381231 ~ 29381508 (+) |
| G2017603 | LOC106562252 | non-coding | upstream | 104952 | 29334762 ~ 29335428 (+) |
| G2017605 | NA | non-coding | upstream | 117723 | 29322217 ~ 29322657 (+) |
| G2017604 | NA | non-coding | upstream | 118566 | 29321593 ~ 29321814 (+) |
| G2017675 | NA | non-coding | downstream | 16520 | 29457147 ~ 29457453 (+) |
| G2017676 | NA | non-coding | downstream | 17022 | 29457649 ~ 29457851 (+) |
| G2017679 | NA | non-coding | downstream | 20172 | 29460799 ~ 29461000 (+) |
| G2017680 | NA | non-coding | downstream | 20917 | 29461544 ~ 29461775 (+) |
| LOC110506606 | LOC106562262 | non-coding | downstream | 306658 | 29736045 ~ 29748130 (+) |
| LOC110506235 | LOC106587398 | other | upstream | 392548 | 29038558 ~ 29047832 (+) |
| LOC110506577 | LOC106562242 | other | upstream | 491304 | 28945317 ~ 28952574 (+) |
| cog4 | cog4 | other | upstream | 719829 | 28712737 ~ 28725956 (+) |
| G2017100 | cgnl1 | other | upstream | 1185928 | 28251849 ~ 28254452 (+) |
| G2015527 | NA | other | upstream | 2795485 | 26644348 ~ 26644895 (+) |
| G2018721 | NA | other | downstream | 393549 | 29834176 ~ 29834558 (+) |
| G2018959 | NA | other | downstream | 777972 | 30218599 ~ 30219119 (+) |
| G2019067 | NA | other | downstream | 957213 | 30397840 ~ 30398218 (+) |
| G2019479 | NA | other | downstream | 1076540 | 30517167 ~ 30518593 (+) |
| G2019478 | NA | other | downstream | 1084008 | 30524635 ~ 30528408 (+) |
