Gene
RNA
| Item | Value |
|---|---|
| gene id | G2018769 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 29880505 ~ 29880851 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2309030 | True | 347 | lncRNA | 0.29 | 1 | 29880505 | 29880851 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506607 | NA | coding | upstream | 106454 | 29755256 ~ 29774051 (+) |
| LOC110506606 | LOC106562262 | coding | upstream | 132375 | 29736045 ~ 29748130 (+) |
| LOC110506604 | LOC106562279 | coding | upstream | 144728 | 29718524 ~ 29735777 (+) |
| trnav-cac-86 | NA | coding | upstream | 177321 | 29703112 ~ 29703184 (+) |
| LOC110506600 | LOC106587380 | coding | upstream | 225577 | 29643508 ~ 29654928 (+) |
| LOC110506610 | LOC107388308 | coding | downstream | 108904 | 29989755 ~ 29990519 (+) |
| LOC110506612 | LOC106587369 | coding | downstream | 112921 | 29993772 ~ 29996508 (+) |
| LOC110506613 | psf2 | coding | downstream | 120202 | 30001053 ~ 30004097 (+) |
| LOC110506615 | LOC106587442 | coding | downstream | 597704 | 30478555 ~ 30481821 (+) |
| LOC110506620 | cmc2 | coding | downstream | 670658 | 30551509 ~ 30556040 (+) |
| G2018768 | LOC106612417 | non-coding | upstream | 534 | 29879734 ~ 29879971 (+) |
| G2018765 | NA | non-coding | upstream | 2661 | 29877645 ~ 29877844 (+) |
| G2018758 | NA | non-coding | upstream | 11966 | 29868318 ~ 29868539 (+) |
| G2018752 | NA | non-coding | upstream | 20296 | 29859900 ~ 29860209 (+) |
| G2018737 | NA | non-coding | upstream | 36840 | 29843466 ~ 29843665 (+) |
| G2018770 | NA | non-coding | downstream | 443 | 29881294 ~ 29881626 (+) |
| G2018807 | NA | non-coding | downstream | 55209 | 29936060 ~ 29936263 (+) |
| G2018810 | NA | non-coding | downstream | 58290 | 29939141 ~ 29939676 (+) |
| G2018816 | NA | non-coding | downstream | 64698 | 29945549 ~ 29945806 (+) |
| G2018821 | NA | non-coding | downstream | 69685 | 29950536 ~ 29951386 (+) |
| G2018721 | NA | other | upstream | 45947 | 29834176 ~ 29834558 (+) |
| LOC110506235 | LOC106587398 | other | upstream | 832673 | 29038558 ~ 29047832 (+) |
| LOC110506577 | LOC106562242 | other | upstream | 931429 | 28945317 ~ 28952574 (+) |
| cog4 | cog4 | other | upstream | 1159954 | 28712737 ~ 28725956 (+) |
| G2017100 | cgnl1 | other | upstream | 1626053 | 28251849 ~ 28254452 (+) |
| G2018959 | NA | other | downstream | 337748 | 30218599 ~ 30219119 (+) |
| G2019067 | NA | other | downstream | 516989 | 30397840 ~ 30398218 (+) |
| G2019479 | NA | other | downstream | 636316 | 30517167 ~ 30518593 (+) |
| G2019478 | NA | other | downstream | 643784 | 30524635 ~ 30528408 (+) |
| G2019882 | NA | other | downstream | 1012427 | 30893278 ~ 30936313 (+) |
