G2022042 (LOC106562320)


Basic Information

Item Value
gene id G2022042
gene name LOC106562320
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 32875255 ~ 32878771 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2312761
TTGCTTTATTCCATTACAGGCAGGGCAGTGAGGGGTGGCGGGGGTTAAATACATTCTCAATCTGGGACAGGAAGGAAAGGGTAGGAAACCAGGTAAACATGGACAAGACATCATTGAATTATTTATCTGTCAACACAGACCAATTTCTAAATCAGTTATCAATTTAGTTCAATTCTGCCAATAATCTGTCATATAGATCGTTCTCACTAAATATATTCATTTTTCTTCTCCATACATTTGTACTTTTTCTATATAATGTCAATATTGATATAGATTTGTAATATACCTGTTATCGTAATACAGTCATTTTCTAcgttattttatttatatttaatattttttatttatcttttacaaagacaggaaacaagaCATCTGCATATAAATAAGGACAAAGAAGACACTGCTGTACATGTCATGGTGAAAAGGGAATGTGGCATCTTTCTATGGTGGTGCTGATATTGCCTACACTGGGCCGTGACCCACTGCAGCAAAGCTATTTCACACTGGTTGTTCAACACTGTGCTGGCACAGTAGAGACTGCTGTGAGAGCATGGATTTGGGTGGTGTCAAACTGTAATCTGGCCACAGAGTGAGGCCTGTTGAGTGACACCACAGCAAAGCCAATTCTAAGAGTACAGCTTCTATAGGTCACCACAGTGACCCCTTCATAATGGATGTATTGTATCATAGGTCACTGTAATGACCCCACTTCCTATTATAGaatctgtctttctgccatcACCATGGCAgctagtggaggctgctgagtggtgaaaggctcataataatggctggaacagagcgaatggaatcaaacacatagaaaccatgtttttgataccattccgATAATTCCGCTCCAGCTATTACCAAGAgctcgtcctccccaattaaggtggcaccaacctcctgtgatgttgACACCCAGTACTTTTTCACTTGGACAGAGTTATTTTCCCACAGAGATATTCCCTTATTTTGAGAGTCGGCTGAAATTCACCAGCCTTTCCCAGCAACTGAAAGCCGAACTCATAGAACGCAAACCAAACTGTTACAAGAGTAATAATAAGGATAATAATAACATCAATAATAGTAAGAAACAACAGTAATAAATAATGTAGTATGTCTGATCCAACAAATACAACTGATATGAAATATGTTTGTAAAATGTAGTGAAAGTGGGCACTACAACCCGTACAGTTCAACCTCAATATGCTTGAGATGAACCAGTTTAAAGGGAACCAAAGACATAGAAGTCATTGACATAATTGTGTACCTCAGCAAGACCCCTTTAAGAGGAACAATCTCCTACAGTGCAtctcatgttttttttaaatagcataATTGGCTTGGTACAAACACTTAGAGAGAGACATGTTTTGGGAGATATGCGCCATGGCAGTGGTGTTGGGATAGCGATACCAAAATGTATCTTCTCCCTCTCGGAGTTAAACTTGAAACCTGTATCTTTGTTTTGTCAAAGTGTACATTTTACAGTATTTCACAAACATAAACAATATCACATCTTATAAATACATTTGGCAATACATTTTTGGGCAAAAAGGGGGCAAATTGTGCATTTTGATGTGTGTGAGATGGTCCGTATGTTAGTAAGAGTTACTGACTGACGAGTGAGTTCTGTTAAACAAAATGGATACTACGTTCCTCATGCTATAAAAGACAACCAAAGACCAAAATCACATTCTTAACATTTGTCACAATCACTGTTTTAAGACACATCAATTCTCTATGATCGACACTCCTTCTCTTCCACACTGTCATTCCCTGATAGACCTGAGAAACAaaacgtctcctctctctcctctctattgttCAGCATCTGTCTCCGTTTTTTTTAACTTTCCTGATATTAAAGAGGAATAAGCTTTAGGAGCTGATGAAGGAGGAGGGTAAGTTAATTGTGATTATGTGCCAATAAAAACCCCACCTAGTGTCTAACTCCTCCCTATCCCTGTTCAGTTGTCTCCCATTTGATAAAGTCACGTCACTGCAGGGCTGTATGCTACCATGTGTTGATGTGAGATAGTGTGTGTTGGAATGACAGTCAGTGGTAAGGCTATTCACCCCAAAGCAGAACAGGCCCCTGGCATGCAGACAGAAATTAAAATGTTTATTACAATAGCAGTGAAAATGCTTTACACAGCTTTTGACACCTGAAAATGGAACAAGAGTTTTTCATCTCAGTCTTATTCATTATGGTCTGCCATGTCATGTCTTTGTAAGGTACTGTAACAGCATAGCAGATTGCATTCCATCGCATGCATGTTCAGTGATACTTTAACATCAGATAGATGCAGCAACGGAataaggaaagaggagagagaaagagtcacgGAGGGACTGAGTGGGCCACTATACCATAGACGCCAGTGTGTTTTCTTCAGGGTAGGGACAGGGAGTGGAGGTTCGTAGTGAGTGCGTGGGAAGGGGTGCTCCGTCGGCGGGAGAGAGGTCATTGAGCTcaccagaggaagagagagggaatgagggtgagagggagatgcCAGAGGAAGGGTCAGCAGATCCAGCAAAGGTACGCGGGGGCTTGGGGACCAGGTTAGGCTCCATTGTGGCCCGAGCCAGAAGCTGTGTATCGTCCCCCCTCGGTCCTTCCACTggcccctctccctgaccataCGACCCCCGACCGGACTCAGACTCCCCGTCAGACAACTCCAGAGGTGGTGAGCCACTGCCATCCAGCCTAAAGAGAGAGTCCAGGTACTGTGCAAACTCCAGCACTGCCTGGCTAGGGTTGCCGTTGGACAGCTGggctggaggagtggaggaggagggatgtgactctcctgtctctgtttccCATCCTTctacctctactccctcctcctcctcctcctcatggcTGATCCGTGGGCTGAGGGGAGCATTAGGGGTGCTGCCTGGGCTGTAAATGCCAGGCATTTGATGGCAAGGGACGACACAAGGCTCTTTTTGTGTGAAAGGCTGACCTACGACACTCTGGGCCAGTGGTGCTGGGGAGTGGTGGCCACTATAGTGCGGGGTGGAAGGGGAGAGCCGCATGGGGTAGTCTGGGGTGGAGCCAGATCCCAGAGGAGTGAAGTAAGGTCCTGCCTCTCCCAGCTCGTGCTCTGGGGTGGCCTGGTAGAGGCAGTCGGCAGCCAGCAGCTCGGTGCGGGAGCTGAGAGAGGGGTTCTCCTCAGGGATAGGTGCATTCAGTTGGAAGGGGAGGCACCCCAGCATGGGCGAGCCCCTGAGTGCAGCTGAGGAGCGTCGGGAGTCCAGGCTGTAGAGGGACTCGGCGTCTGACAGGCTCTCCATCACGGCCAGGGGGGCGTGGCGGTCCCTCAGCTCCACGGTAAGGCGCTCCCTGGCCCCCCGCAGAACCACTGGCACTGGGGGAGGGGGGCACTCCGCAAAGCCATCCAGTGATATCTCAGAGC

Function

NR:

description
sn1-specific diacylglycerol lipase alpha-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2312761 True 3446 TUCP 0.46 2 32875255 32878771
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110506665 polr2l coding downstream 44140 32829426 ~ 32831115 (-)
LOC110506664 sdhaf2 coding downstream 49506 32823041 ~ 32825749 (-)
LOC110506653 LOC106563521 coding downstream 289616 32528233 ~ 32585639 (-)
LOC110506651 LOC106587483 coding downstream 442794 32405119 ~ 32432461 (-)
LOC110506648 LOC106563524 coding downstream 537950 32323127 ~ 32337305 (-)
LOC110506670 LOC106587508 coding upstream 21790 32900561 ~ 32926267 (-)
nucb2a LOC106562318 coding upstream 280571 33159342 ~ 33168228 (-)
LOC118944422 NA coding upstream 508081 33386852 ~ 33388945 (-)
LOC100136595 calc1 coding upstream 922563 33800216 ~ 33815643 (-)
LOC110506676 pde3b coding upstream 967239 33846010 ~ 33927989 (-)
G2022016 LOC106587514 non-coding downstream 65283 32809410 ~ 32809972 (-)
G2022015 NA non-coding downstream 66107 32808935 ~ 32809148 (-)
G2022014 LOC106587514 non-coding downstream 66810 32808137 ~ 32808445 (-)
G2022008 NA non-coding downstream 78045 32796943 ~ 32797210 (-)
G2022053 NA non-coding upstream 15111 32893882 ~ 32894387 (-)
G2022062 NA non-coding upstream 48544 32927315 ~ 32927655 (-)
G2022071 NA non-coding upstream 60636 32939407 ~ 32939632 (-)
G2022091 NA non-coding upstream 82365 32961136 ~ 32961394 (-)
G2022109 NA non-coding upstream 102130 32980901 ~ 32981243 (-)
G2021975 NA other downstream 40774 32831627 ~ 32834481 (-)
G2021979 NA other downstream 56275 32810623 ~ 32818980 (-)
G2021956 NA other downstream 158342 32716126 ~ 32716913 (-)
G2021837 NA other downstream 345386 32523537 ~ 32529869 (-)
LOC110506691 LOC106562361 other upstream 1622082 34499589 ~ 34523950 (-)
G2024673 NA other upstream 1997651 34876422 ~ 34928381 (-)
G2024949 NA other upstream 2517303 35396074 ~ 35399967 (-)
G2025061 NA other upstream 2617016 35495787 ~ 35497803 (-)

Expression

G2022042(LOC106562320) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G2022042(LOC106562320) Expression in each Bioproject

Bar chart with 14 bars.
G2022042(LOC106562320) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network