Gene
RNA
| Item | Value |
|---|---|
| gene id | G2022720 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 33165551 ~ 33167355 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2313512 | True | 649 | lncRNA | 0.41 | 2 | 33165551 | 33167355 |
33,164,000
33,164,400
33,164,800
33,165,200
33,165,600
33,166,000
33,166,400
33,166,800
33,167,200
33,167,600
33,168,000
33,168,400
33,168,800
33,169,200
33,169,600
33,170,000
33,170,400
33,170,800
33,171,200
33,171,600
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506670 | LOC106587508 | coding | downstream | 239284 | 32900561 ~ 32926267 (-) |
| LOC110506665 | polr2l | coding | downstream | 334436 | 32829426 ~ 32831115 (-) |
| LOC110506664 | sdhaf2 | coding | downstream | 339802 | 32823041 ~ 32825749 (-) |
| LOC110506653 | LOC106563521 | coding | downstream | 579912 | 32528233 ~ 32585639 (-) |
| LOC110506651 | LOC106587483 | coding | downstream | 733090 | 32405119 ~ 32432461 (-) |
| LOC118944422 | NA | coding | upstream | 219497 | 33386852 ~ 33388945 (-) |
| LOC100136595 | calc1 | coding | upstream | 633979 | 33800216 ~ 33815643 (-) |
| LOC110506676 | pde3b | coding | upstream | 678655 | 33846010 ~ 33927989 (-) |
| LOC110506684 | LOC106587537 | coding | upstream | 947154 | 34109965 ~ 34118269 (-) |
| LOC110506685 | rbtn1 | coding | upstream | 985321 | 34152676 ~ 34184095 (-) |
| G2022150 | NA | non-coding | downstream | 22758 | 33142557 ~ 33142793 (-) |
| G2022141 | NA | non-coding | downstream | 30706 | 33134589 ~ 33134845 (-) |
| G2022140 | NA | non-coding | downstream | 56907 | 33108440 ~ 33108644 (-) |
| G2022139 | NA | non-coding | downstream | 86125 | 33079132 ~ 33079426 (-) |
| G2022133 | NA | non-coding | downstream | 108591 | 33056428 ~ 33056960 (-) |
| G2022722 | NA | non-coding | upstream | 2099 | 33169454 ~ 33169745 (-) |
| G2022726 | NA | non-coding | upstream | 6009 | 33173364 ~ 33173670 (-) |
| G2022728 | LOC107586033 | non-coding | upstream | 12378 | 33179733 ~ 33183283 (-) |
| G2022813 | NA | non-coding | upstream | 150555 | 33317910 ~ 33319072 (-) |
| G2022939 | NA | non-coding | upstream | 362012 | 33529367 ~ 33532946 (-) |
| G2022042 | LOC106562320 | other | downstream | 286780 | 32875255 ~ 32878771 (-) |
| G2021975 | NA | other | downstream | 331070 | 32831627 ~ 32834481 (-) |
| G2021979 | NA | other | downstream | 346571 | 32810623 ~ 32818980 (-) |
| G2021956 | NA | other | downstream | 448638 | 32716126 ~ 32716913 (-) |
| LOC110506691 | LOC106562361 | other | upstream | 1333498 | 34499589 ~ 34523950 (-) |
| G2024673 | NA | other | upstream | 1709067 | 34876422 ~ 34928381 (-) |
| G2024949 | NA | other | upstream | 2228719 | 35396074 ~ 35399967 (-) |
| G2025061 | NA | other | upstream | 2328432 | 35495787 ~ 35497803 (-) |
