Gene
RNA
| Item | Value |
|---|---|
| gene id | G2023086 |
| gene name | copb |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 33937830 ~ 33939712 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| copb | P-type Cu2+ transporter; copper resistance protein B |
| description |
|---|
| coatomer subunit beta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2313924 | True | 971 | lncRNA | 0.51 | 6 | 33937830 | 33939712 |
33,935,200
33,935,600
33,936,000
33,936,400
33,936,800
33,937,200
33,937,600
33,938,000
33,938,400
33,938,800
33,939,200
33,939,200
33,939,600
33,940,000
33,940,400
33,940,800
33,941,200
33,941,600
33,942,000
33,942,400
33,942,800
NC_048590.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506676 | pde3b | coding | downstream | 9841 | 33846010 ~ 33927989 (-) |
| LOC100136595 | calc1 | coding | downstream | 122187 | 33800216 ~ 33815643 (-) |
| LOC118944422 | NA | coding | downstream | 548885 | 33386852 ~ 33388945 (-) |
| nucb2a | LOC106562318 | coding | downstream | 769602 | 33159342 ~ 33168228 (-) |
| LOC110506670 | LOC106587508 | coding | downstream | 1011563 | 32900561 ~ 32926267 (-) |
| LOC110506684 | LOC106587537 | coding | upstream | 174797 | 34109965 ~ 34118269 (-) |
| LOC110506685 | rbtn1 | coding | upstream | 212964 | 34152676 ~ 34184095 (-) |
| LOC110506117 | LOC106587539 | coding | upstream | 414061 | 34353773 ~ 34358034 (-) |
| LOC110506686 | LOC106562363 | coding | upstream | 436474 | 34376186 ~ 34390655 (-) |
| LOC110506687 | LOC106562362 | coding | upstream | 449937 | 34389577 ~ 34417992 (-) |
| G2023088 | LOC106587500 | non-coding | downstream | 956 | 33936526 ~ 33936874 (-) |
| G2023105 | LOC106587531 | non-coding | downstream | 121948 | 33814888 ~ 33815882 (-) |
| G2023023 | NA | non-coding | downstream | 262115 | 33675390 ~ 33675715 (-) |
| G2023017 | NA | non-coding | downstream | 270287 | 33667334 ~ 33667543 (-) |
| G2023013 | NA | non-coding | downstream | 273694 | 33663810 ~ 33664136 (-) |
| G2023085 | NA | non-coding | upstream | 813 | 33940525 ~ 33941420 (-) |
| G2023172 | NA | non-coding | upstream | 37926 | 33977638 ~ 33990652 (-) |
| G2023221 | NA | non-coding | upstream | 111586 | 34051298 ~ 34064510 (-) |
| G2023273 | NA | non-coding | upstream | 188596 | 34128308 ~ 34128582 (-) |
| G2022042 | LOC106562320 | other | downstream | 1059059 | 32875255 ~ 32878771 (-) |
| G2021975 | NA | other | downstream | 1103349 | 32831627 ~ 32834481 (-) |
| G2021979 | NA | other | downstream | 1118850 | 32810623 ~ 32818980 (-) |
| G2021956 | NA | other | downstream | 1220917 | 32716126 ~ 32716913 (-) |
| LOC110506691 | LOC106562361 | other | upstream | 561141 | 34499589 ~ 34523950 (-) |
| G2024673 | NA | other | upstream | 936710 | 34876422 ~ 34928381 (-) |
| G2024949 | NA | other | upstream | 1456362 | 35396074 ~ 35399967 (-) |
| G2025061 | NA | other | upstream | 1556075 | 35495787 ~ 35497803 (-) |
| LOC110506721 | LOC106562390 | other | upstream | 1608548 | 35401501 ~ 35548790 (-) |
