G2024471


Basic Information

Item Value
gene id G2024471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 35543175 ~ 35543374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2315475
gtacatcagaggaggctggtgggaggagctaaaagaggacaggctcattgtaatgtctagcatttaataaatggaacggagtcaaacatgtggtttccatttgTTTGATGTGTTGGATATCGTTCCATCAATTCCATTCCAGTCTTTATGATGAGCCCATCCTCCTTTTGCTCTTCCCAACAGCCTCCTctgataataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2315475 True 200 lncRNA 0.43 1 35543175 35543374

Neighbor

gene id symbol gene type direction distance location
LOC110506720 LOC106562374 coding upstream 146745 35367891 ~ 35396430 (+)
LOC110506717 LOC106562373 coding upstream 192965 35141567 ~ 35350210 (+)
LOC110506714 LOC106562344 coding upstream 507158 34992692 ~ 35036017 (+)
LOC110506118 LOC106562345 coding upstream 562476 34933364 ~ 34980699 (+)
LOC110506713 LOC106562345 coding upstream 619348 34921061 ~ 34923827 (+)
LOC110506722 LOC106562375 coding downstream 8165 35551539 ~ 35558728 (+)
ss18l2 s18l2 coding downstream 17411 35560782 ~ 35562974 (+)
gpib LOC106562377 coding downstream 64832 35608206 ~ 35625906 (+)
LOC110506120 LOC106562381 coding downstream 141691 35685065 ~ 35687778 (+)
LOC110506728 cnep1r1 coding downstream 144679 35688053 ~ 35690950 (+)
G2024470 NA non-coding upstream 42 35542853 ~ 35543133 (+)
G2024437 NA non-coding upstream 92495 35450474 ~ 35450680 (+)
G2024435 NA non-coding upstream 94403 35448573 ~ 35448772 (+)
G2024432 NA non-coding upstream 97577 35445370 ~ 35445598 (+)
G2024429 NA non-coding upstream 100801 35441956 ~ 35442374 (+)
G2024553 LOC106562336 non-coding downstream 137724 35681098 ~ 35683507 (+)
G2024598 brd7 non-coding downstream 276331 35819705 ~ 35820334 (+)
G2024657 NA non-coding downstream 358332 35901706 ~ 35902214 (+)
tm2d3 tm2d3 other upstream 646550 34891516 ~ 34896626 (+)
G2022626 NA other upstream 1557330 33982717 ~ 33985845 (+)
LOC110506662 LOC106587514 other upstream 2753966 32702746 ~ 32819040 (+)
LOC110506661 LOC106563545 other upstream 2843039 32685823 ~ 32700136 (+)
G2024473 LOC106562390 other downstream 4598 35547972 ~ 35548749 (+)
G2025422 NA other downstream 515660 36059034 ~ 36059518 (+)
G2027338 LOC106578490 other downstream 2303921 37847295 ~ 37847578 (+)
G2027611 NA other downstream 2674852 38218226 ~ 38219793 (+)

Expression


Co-expression Network