G2024657


Basic Information

Item Value
gene id G2024657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 35901706 ~ 35902214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2315680
ATTTGATACattgttaattccacatggttacagggttaattccacatggttacaggattaattccacatggttacagggttaaaacaaaaacaactcaAAGGTTaatagtttaggtattcattctgcgtggttacattgttaattccacatggttacattgttaattccacatggttacagggttaattccacatggttacagggttaattccacatggttacattgttaattccacatggttacagggttaaaacaaaaacaactcaAAGGTTAACAGTTTAGGTATTAATTCTGAGTGGTTtaggttagggctatggtttggtgaaggcttaaaataaaataataataaattacaCGCT

Function

NR:

description
proline-rich protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2315680 True 361 lncRNA 0.34 3 35901706 35902214

Neighbor

gene id symbol gene type direction distance location
LOC110506731 LOC106587576 coding upstream 88788 35736475 ~ 35812918 (+)
LOC110506730 LOC106587575 coding upstream 167929 35700790 ~ 35733777 (+)
LOC110506727 LOC106587571 coding upstream 203600 35691262 ~ 35698106 (+)
LOC110506728 cnep1r1 coding upstream 210756 35688053 ~ 35690950 (+)
LOC110506120 LOC106562381 coding upstream 213928 35685065 ~ 35687778 (+)
LOC110506733 LOC106562389 coding downstream 10541 35912755 ~ 35950964 (+)
LOC110506121 nod2 coding downstream 91849 35994063 ~ 36014868 (+)
LOC110506735 LOC106562387 coding downstream 109112 36011326 ~ 36042447 (+)
LOC110506122 NA coding downstream 291265 36193479 ~ 36194049 (+)
LOC118944405 LOC107550285 coding downstream 899666 36801880 ~ 36815681 (+)
G2024598 brd7 non-coding upstream 81372 35819705 ~ 35820334 (+)
G2024553 LOC106562336 non-coding upstream 218199 35681098 ~ 35683507 (+)
ss18l2 s18l2 non-coding upstream 338732 35560782 ~ 35562974 (+)
G2024471 NA non-coding upstream 358332 35543175 ~ 35543374 (+)
G2025280 NA non-coding downstream 19066 35921280 ~ 35921506 (+)
G2025281 NA non-coding downstream 19916 35922130 ~ 35922386 (+)
G2025283 NA non-coding downstream 21249 35923463 ~ 35923680 (+)
G2025286 NA non-coding downstream 27216 35929430 ~ 35929661 (+)
G2025289 NA non-coding downstream 31248 35933462 ~ 35933905 (+)
G2024473 LOC106562390 other upstream 352957 35547972 ~ 35548749 (+)
LOC110506714 LOC106562344 other upstream 904516 34992692 ~ 35036017 (+)
tm2d3 tm2d3 other upstream 1005081 34891516 ~ 34896626 (+)
G2022626 NA other upstream 1915861 33982717 ~ 33985845 (+)
G2025422 NA other downstream 156820 36059034 ~ 36059518 (+)
G2027338 LOC106578490 other downstream 1945081 37847295 ~ 37847578 (+)
G2027611 NA other downstream 2316012 38218226 ~ 38219793 (+)
G2027635 NA other downstream 2330322 38232536 ~ 38232938 (+)
G2027708 LOC106562446 other downstream 2521757 38423971 ~ 38424603 (+)

Expression


Co-expression Network