Gene
RNA
| Item | Value |
|---|---|
| gene id | G2025280 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 35921280 ~ 35921506 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2316366 | True | 227 | lncRNA | 0.56 | 1 | 35921280 | 35921506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506731 | LOC106587576 | coding | upstream | 108362 | 35736475 ~ 35812918 (+) |
| LOC110506730 | LOC106587575 | coding | upstream | 187503 | 35700790 ~ 35733777 (+) |
| LOC110506727 | LOC106587571 | coding | upstream | 223174 | 35691262 ~ 35698106 (+) |
| LOC110506728 | cnep1r1 | coding | upstream | 230330 | 35688053 ~ 35690950 (+) |
| LOC110506120 | LOC106562381 | coding | upstream | 233502 | 35685065 ~ 35687778 (+) |
| LOC110506121 | nod2 | coding | downstream | 72557 | 35994063 ~ 36014868 (+) |
| LOC110506735 | LOC106562387 | coding | downstream | 89820 | 36011326 ~ 36042447 (+) |
| LOC110506122 | NA | coding | downstream | 271973 | 36193479 ~ 36194049 (+) |
| LOC118944405 | LOC107550285 | coding | downstream | 880374 | 36801880 ~ 36815681 (+) |
| LOC110506743 | fto | coding | downstream | 1100069 | 37021575 ~ 37243475 (+) |
| G2024657 | NA | non-coding | upstream | 19066 | 35901706 ~ 35902214 (+) |
| G2024598 | brd7 | non-coding | upstream | 100946 | 35819705 ~ 35820334 (+) |
| G2024553 | LOC106562336 | non-coding | upstream | 237773 | 35681098 ~ 35683507 (+) |
| ss18l2 | s18l2 | non-coding | upstream | 358306 | 35560782 ~ 35562974 (+) |
| G2025281 | NA | non-coding | downstream | 624 | 35922130 ~ 35922386 (+) |
| G2025283 | NA | non-coding | downstream | 1957 | 35923463 ~ 35923680 (+) |
| G2025286 | NA | non-coding | downstream | 7924 | 35929430 ~ 35929661 (+) |
| G2025289 | NA | non-coding | downstream | 11956 | 35933462 ~ 35933905 (+) |
| G2025290 | NA | non-coding | downstream | 12552 | 35934058 ~ 35934373 (+) |
| G2024473 | LOC106562390 | other | upstream | 372531 | 35547972 ~ 35548749 (+) |
| LOC110506714 | LOC106562344 | other | upstream | 924090 | 34992692 ~ 35036017 (+) |
| tm2d3 | tm2d3 | other | upstream | 1024655 | 34891516 ~ 34896626 (+) |
| G2022626 | NA | other | upstream | 1935435 | 33982717 ~ 33985845 (+) |
| G2025422 | NA | other | downstream | 137528 | 36059034 ~ 36059518 (+) |
| G2027338 | LOC106578490 | other | downstream | 1925789 | 37847295 ~ 37847578 (+) |
| G2027611 | NA | other | downstream | 2296720 | 38218226 ~ 38219793 (+) |
| G2027635 | NA | other | downstream | 2311030 | 38232536 ~ 38232938 (+) |
| G2027708 | LOC106562446 | other | downstream | 2502465 | 38423971 ~ 38424603 (+) |
