G2027732


Basic Information

Item Value
gene id G2027732
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 38456366 ~ 38457158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2319119
aacatacagataggatgctggggatgatttgaCCAAGAgcagccaaacatacagataggatgctggggatgatttgaccaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacatataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaatgaagaacagccaaacatacagataggatgctggggatgatttgaccaagaacagacaaacatacagataggatgctggggatgGTTTGAATGAAGAACATAAGATGGCAACAATAGCTGAGCAAAGTTTTAGACAGATAACTTCAAAAATGagcgagctacatgacattgagcatgacgtcacccaggtgtcccacacaaatgtacccaaatgtacccaagtggtcgaattggtacagtgatacattttgaagggaataactatatacaaaatacataaatgctattctaacacaccccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2319119 True 702 lncRNA 0.41 2 38456366 38457158
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110506123 LOC106562415 coding upstream 55894 38373941 ~ 38400472 (+)
LOC110506756 lt4r1 coding upstream 101838 38353289 ~ 38354528 (+)
LOC110506755 LOC106587608 coding upstream 103328 38351446 ~ 38353038 (+)
LOC118944403 NA coding upstream 120124 38322750 ~ 38337288 (+)
LOC110506752 LOC106562414 coding upstream 155527 38260378 ~ 38300839 (+)
ddx28 LOC106587623 coding downstream 52064 38509222 ~ 38513114 (+)
LOC110526625 LOC105022628 coding downstream 59599 38516757 ~ 38658767 (+)
LOC110526634 LOC106562411 coding downstream 209484 38666642 ~ 38679698 (+)
LOC110526633 LOC106562410 coding downstream 223986 38681144 ~ 38687552 (+)
LOC110526636 LOC106596078 coding downstream 230802 38687960 ~ 38791413 (+)
G2027729 NA non-coding upstream 2963 38452790 ~ 38453403 (+)
G2027712 NA non-coding upstream 26408 38429707 ~ 38429958 (+)
G2027711 NA non-coding upstream 27218 38428657 ~ 38429148 (+)
G2027710 NA non-coding upstream 29046 38427076 ~ 38427320 (+)
G2027684 NA non-coding upstream 49552 38405201 ~ 38406814 (+)
G2027765 NA non-coding downstream 51019 38508177 ~ 38508422 (+)
G2027769 NA non-coding downstream 57363 38514521 ~ 38514766 (+)
G2027824 NA non-coding downstream 135486 38592644 ~ 38595575 (+)
G2027858 NA non-coding downstream 218179 38675337 ~ 38676391 (+)
G2027872 NA non-coding downstream 249123 38706281 ~ 38706619 (+)
G2027708 LOC106562446 other upstream 31763 38423971 ~ 38424603 (+)
G2027635 NA other upstream 223428 38232536 ~ 38232938 (+)
G2027611 NA other upstream 236573 38218226 ~ 38219793 (+)
G2027338 LOC106578490 other upstream 608788 37847295 ~ 37847578 (+)
G2025422 NA other upstream 2396848 36059034 ~ 36059518 (+)
LOC110506777 LOC106592882 other downstream 1351941 39809065 ~ 39815331 (+)
G2029691 NA other downstream 2084398 40541556 ~ 40542264 (+)
G2029990 NA other downstream 2455777 40912935 ~ 40913478 (+)
LOC110512697 LOC106562529 other downstream 3143816 41600933 ~ 41643474 (+)
LOC110526920 scg3 other downstream 3247925 41688562 ~ 41722381 (+)

Expression

G2027732 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G2027732 Expression in each Bioproject

Bar chart with 18 bars.
G2027732 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network