G2029908


Basic Information

Item Value
gene id G2029908
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40672703 ~ 40673574 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2321745
caacacttTCCATCCACCAGATGGGATTGTCTGGTGAAAAGTACCTACTTTTCCAAAACTCCATTTGtttgataaataataataataatagtcacTATGCTTTCCAAACCACAAAGACCGAATTAAAATGTTTTCTAAAAAGGAATTGATGAACTGTTATGGAGGCAGTGGAGGAAGGACCAGGgtgcaacatttgagagaaataagctttttgtgcatatggaaactGTCTGGCAtcgtttatttcagctcatgaaaccaatcACTTTACAtgatgcatttatatttttattccgtGTATATATGTCCATGTGAAAATGTGCTGCAAACTGATATGTCACTGCTCAAGTTGGTAATCCAATGTTTTGAGAATAGCTGGCTAGCCTCTGTCCAGTACATAAGATAACATTACATTTTTGCATGTTAAGGCTATGTCATGGCATGGCCCTTTATGGGTATAGATCGTGGCATCCccctctcctacacccaggttctgttatctcaggtcgtaaattcctggaggagactctctcctcctggccatgcagtatagagatagagagagagtttcacagtagaacaaaggaacttcttctacatcacagaacttgagaactgaacaatatccatgttttggagaatgtgtaaacggtcggtggagaagccagctacgacccggtccgttttgtttcatgtttgtgaactcatgaaagacaatacagccacattaccattaCTCTCTTTATACAGGTGCCTCCGTTATGaggtttgcatctaattattgtataaaatgaatgagtaaagattaaactatttgtgaaaatatGTAAGGTGATGTTAAACCTTTTAATGAaagagaattgtattccctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2321745 True 872 lncRNA 0.38 1 40672703 40673574
Loading

Neighbor

gene id symbol gene type direction distance location
dut dut coding downstream 4861 40663518 ~ 40667842 (-)
LOC110519217 LOC106587666 coding downstream 306756 40335544 ~ 40365947 (-)
LOC110506134 LOC106587633 coding downstream 364792 40296124 ~ 40307911 (-)
LOC110506132 LOC106562499 coding downstream 402851 40213044 ~ 40269852 (-)
pldn pldn coding downstream 471787 40197134 ~ 40200916 (-)
LOC110506139 slc12a1 coding upstream 6847 40680421 ~ 40736226 (-)
LOC110519157 slc24a5 coding upstream 130529 40804103 ~ 40832292 (-)
LOC118944423 NA coding upstream 197858 40871432 ~ 40873618 (-)
LOC110519559 LOC106562535 coding upstream 264456 40938030 ~ 40983650 (-)
LOC110506810 LOC106562534 coding upstream 757688 41431262 ~ 41439598 (-)
G2029907 NA non-coding downstream 1023 40671267 ~ 40671680 (-)
G2029876 NA non-coding downstream 90091 40581285 ~ 40582612 (-)
G2029858 fbn1 non-coding downstream 105891 40551179 ~ 40567512 (-)
G2029857 NA non-coding downstream 124126 40548322 ~ 40548577 (-)
G2029856 NA non-coding downstream 130825 40541562 ~ 40541878 (-)
G2029918 NA non-coding upstream 35885 40709459 ~ 40709782 (-)
G2029919 NA non-coding upstream 37756 40711330 ~ 40714123 (-)
G2029934 NA non-coding upstream 90795 40764369 ~ 40764612 (-)
G2030117 NA non-coding upstream 127334 40800908 ~ 40827265 (-)
G2030131 NA non-coding upstream 171176 40844750 ~ 40845691 (-)
G2029844 NA other downstream 164421 40507746 ~ 40508282 (-)
G2028779 NA other downstream 1441893 39229129 ~ 39233948 (-)
G2030106 NA other upstream 102140 40775714 ~ 40778988 (-)
G2030157 NA other upstream 214029 40887603 ~ 40888684 (-)
G2030162 NA other upstream 224896 40898470 ~ 40899021 (-)
G2030156 NA other upstream 233049 40906623 ~ 40907193 (-)
G2030291 NA other upstream 537903 41211477 ~ 41211852 (-)

Expression

G2029908 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G2029908 Expression in each Bioproject

Bar chart with 18 bars.
G2029908 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network