Gene
RNA
| Item | Value |
|---|---|
| gene id | G2030937 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 41887698 ~ 41903072 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2322978 | False | 379 | lncRNA | 0.47 | 2 | 41887698 | 41903072 |
| TU2322979 | True | 1154 | lncRNA | 0.39 | 2 | 41887698 | 41889159 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506142 | LOC106562525 | coding | downstream | 24766 | 41827548 ~ 41862932 (-) |
| LOC110506143 | LOC106562454 | coding | downstream | 107830 | 41755021 ~ 41779868 (-) |
| LOC118944455 | lysm2 | coding | downstream | 149605 | 41723275 ~ 41738093 (-) |
| LOC118944452 | LOC106587168 | coding | downstream | 212225 | 41665197 ~ 41675473 (-) |
| LOC118944424 | LOC106587313 | coding | downstream | 222618 | 41660302 ~ 41665080 (-) |
| LOC118936287 | NA | coding | upstream | 3752 | 41906824 ~ 41916531 (-) |
| LOC118944569 | NA | coding | upstream | 7731 | 41910803 ~ 41911004 (-) |
| LOC110506839 | NA | coding | upstream | 81566 | 41984638 ~ 41986095 (-) |
| LOC110506148 | LOC106587747 | coding | upstream | 83213 | 41986285 ~ 42056568 (-) |
| LOC110506147 | bend2 | coding | upstream | 164660 | 42067732 ~ 42070472 (-) |
| G2030831 | NA | non-coding | downstream | 21378 | 41866019 ~ 41866320 (-) |
| G2030830 | NA | non-coding | downstream | 23364 | 41864096 ~ 41864334 (-) |
| G2030784 | NA | non-coding | downstream | 63657 | 41823533 ~ 41824041 (-) |
| G2030785 | LOC106587817 | non-coding | downstream | 66075 | 41814750 ~ 41821623 (-) |
| G2030811 | NA | non-coding | downstream | 81993 | 41805475 ~ 41805705 (-) |
| G2030945 | NA | non-coding | upstream | 242 | 41903314 ~ 41921439 (-) |
| G2030982 | NA | non-coding | upstream | 71183 | 41974255 ~ 41977636 (-) |
| G2030984 | NA | non-coding | upstream | 75422 | 41978494 ~ 41978943 (-) |
| G2031004 | NA | non-coding | upstream | 128710 | 42031782 ~ 42032359 (-) |
| G2031017 | NA | non-coding | upstream | 157806 | 42060878 ~ 42061560 (-) |
| LOC110515873 | LOC106562546 | other | downstream | 319785 | 41461857 ~ 41567947 (-) |
| G2030291 | NA | other | downstream | 675846 | 41211477 ~ 41211852 (-) |
| G2030156 | NA | other | downstream | 980505 | 40906623 ~ 40907193 (-) |
| G2030162 | NA | other | downstream | 988677 | 40898470 ~ 40899021 (-) |
| G2030157 | NA | other | downstream | 999014 | 40887603 ~ 40888684 (-) |
| LOC110506841 | cart | other | upstream | 244288 | 42147360 ~ 42148871 (-) |
| LOC118944568 | LOC106562433 | other | upstream | 313367 | 42214901 ~ 42217502 (-) |
| G2031225 | NA | other | upstream | 440210 | 42343282 ~ 42346725 (-) |
| G2031259 | NA | other | upstream | 465182 | 42368254 ~ 42369909 (-) |
| G2031286 | LOC106562727 | other | upstream | 556185 | 42459257 ~ 42461315 (-) |
