G2030945


Basic Information

Item Value
gene id G2030945
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 41903314 ~ 41921439 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2322989
tcaatcaatcaatcaaatttattttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgaagaagcacggtggctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgtggggtggccagtcctcttctggctgtgccgggtggagattataacaaaacatggtcaagatgttcaaatgttcataaatgactagcatggtcgaataataataaggcagaatagttgaaactggagcagcagcacagtcaggtggactggggacagcaaggagtcatcatgtcaggtattcctggggcatggtcctagggctcaggtcctccgagagagagaaagaaagagagaattagagagagcatatgtgggatggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcataaatgatcagcatggtcgaataataataaggcagaacagttgaaactggagcagcagcacagccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccaaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggcccactccgaggacaccccaggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcacATAATTTGTGCTTTTCTGGATATTGGTCCACTAGATGGCAGGCTTCAACCAAGTTGTTCCAGAATCCACATTTGTCAGGATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2322989 True 1031 lncRNA 0.48 2 41903314 41921439

Neighbor

gene id symbol gene type direction distance location
LOC110506831 NA coding downstream 8019 41891935 ~ 41895295 (-)
LOC118944570 NA coding downstream 10069 41893131 ~ 41893245 (-)
LOC110506142 LOC106562525 coding downstream 40382 41827548 ~ 41862932 (-)
LOC110506143 LOC106562454 coding downstream 123446 41755021 ~ 41779868 (-)
LOC118944455 lysm2 coding downstream 165221 41723275 ~ 41738093 (-)
LOC110506839 NA coding upstream 63199 41984638 ~ 41986095 (-)
LOC110506148 LOC106587747 coding upstream 64846 41986285 ~ 42056568 (-)
LOC110506147 bend2 coding upstream 146293 42067732 ~ 42070472 (-)
LOC118944459 tubgcp4 coding upstream 196982 42118421 ~ 42138004 (-)
LOC110506841 cart coding upstream 226325 42147360 ~ 42148871 (-)
G2030937 NA non-coding downstream 242 41887698 ~ 41903072 (-)
G2030831 NA non-coding downstream 36994 41866019 ~ 41866320 (-)
G2030830 NA non-coding downstream 38980 41864096 ~ 41864334 (-)
G2030784 NA non-coding downstream 79273 41823533 ~ 41824041 (-)
G2030785 LOC106587817 non-coding downstream 81691 41814750 ~ 41821623 (-)
G2030982 NA non-coding upstream 52816 41974255 ~ 41977636 (-)
G2030984 NA non-coding upstream 57055 41978494 ~ 41978943 (-)
G2031004 NA non-coding upstream 110343 42031782 ~ 42032359 (-)
G2031017 NA non-coding upstream 139439 42060878 ~ 42061560 (-)
G2031029 NA non-coding upstream 173194 42094633 ~ 42094991 (-)
LOC110515873 LOC106562546 other downstream 335401 41461857 ~ 41567947 (-)
G2030291 NA other downstream 691462 41211477 ~ 41211852 (-)
G2030156 NA other downstream 996121 40906623 ~ 40907193 (-)
G2030162 NA other downstream 1004293 40898470 ~ 40899021 (-)
G2030157 NA other downstream 1014630 40887603 ~ 40888684 (-)
LOC118944568 LOC106562433 other upstream 295000 42214901 ~ 42217502 (-)
G2031225 NA other upstream 421843 42343282 ~ 42346725 (-)
G2031259 NA other upstream 446815 42368254 ~ 42369909 (-)
G2031286 LOC106562727 other upstream 537818 42459257 ~ 42461315 (-)

Expression


Co-expression Network