G2030982


Basic Information

Item Value
gene id G2030982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 41974255 ~ 41977636 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2323049
CACAGGACATTTTATTCAGAACATCATTGAGAGAAATAAAGCTGCATTTGTAGAAACCATAGAGCCATTGAGCCGATTACCCCACACAGCAAATAGCATAGAAATTAAAGCAGAGTGCGTTTTCTCAGCTGAATCTTTTAAGTTAAAAGGCTGAAATCACTGAGAGCTCCAAAAGCATTTAAGTGCATTTTTCATTCGTAAAGCCTTCATGAAGAGTTTAGAAGTGCATAGCAGCTAAACAGGGAATTCTTCATTATGCTATTTCATTTTATCTACTCACTTTCCATCTCCTTCAAAAAGTTGACTCAAAATGAATCACACTTTCCAAACCAAACAGATATAGCATTTCAGTGTAGTTTAGCATCCTGAATTGCAGATGAAAGTTGCAAACACTTTACAACAGACAACACTAACCACTACTGTAGGCCAGAGACACAGACCAGAGGTATTACACACAATCAGATATAGTTTCATTGTTTAGATTGACACATCTGTACATGTCCACTGAAACAATGACAGATTACAGTGTTAATGTTGCTTCTATGCAGCAGCAGTGTTGTTCATTCTTTGACTGACATGAAATTGTGTTACGTGACAGAAATAATcatctctacagtacatcacaataCGACTGTACCAACCCCAATAGTCAAATACAGAATctcatttactctctctctcacacacacacacagataacagTCCACAGGCCCTGCAACAAAAACTGTCTAACGCAATGGAACCACAGAGAACCATCCAAAAATACCCCGACCTCCTTTGTTCAGTGAAAAAAAAAGATTGCTTAATACAGTAATGTTTGAGGTGATCTTTTACAAAAATATACAGTTGCTATGATACAAGTTAAAACTGTTAATAAATCTGATGGCTCTGCATTAAAAATATCACCTCACTAGGAGTCATTCAAAGTTAAATATAGATCTCTCCTCATATAGTTTCTATATGATTACTTATATTAAAGTGGTAGTTAAGGTTTAAGgaatttggcaaaaaaaaaaagcagtgcaCAAGTTGTGATCGAATCAAACGTGGATTATTTTTTACAGTCAGTAGAGTACTGCTCCCTCCTATGCAGGTCCTTCAGGGGCTAGGGAAAGTGACTAGGGGCTAGGGGAAGTGACTAGGGGCTACAGGGATAGTAGCCTGGTGCTCCAGTCCGTTTGTGCTTTAGCCAACTCCTGTGTGTTTGCGTTCATTGTCGTGACAACATGTATGGCTTGACAACAATAGAAGAGCTAGCTACAGCACATAGATGtaagatcttcatttgatcacgatgttgcaggagaactttcctgcaatgcaggaaatgtaaattgTGTAGTGTATTTGATGTTTAAAAGGGATTCTGAAGTTTGTGATTTCCACCTAAAATGTATCAAATGACTccttacaaaaatgtccattaataatAATCTACATTTCCAGTTCCTGCAGGatgattttcctgctgtagcaaactggttcaaattaagatcctacatctgtgcaGTGGGGGACCAGGCTCGGATGAGTATATTGAATCTCAAAAGAGGAAACGGAAATAATAAATCTCACCACACATGTAGTGGAGATCTTCTTTACCCCTAAGAAAAGACCTCAGCTGCTAGTCAGGAGTTTCTAAGGCCTGTTCACTTGATTGGCACAAGGTGTGGAGCGCTGCTTGGTCGGGTGCAGCGCAAGAACAGAGTAACAAGAAAGAGCCTACCGTGGCTATTGTTGGCTCGATGCAATACAGTTGTGGCGCATATCAAGTGAACAGACCTTTACGGTGTTACAGACCATCACAGGGAGAGGAGAGCCTAGAATAGGAGAACTGGGGAGACACACAGGGTGACATCTTCTGTTTGATGAAATGTCACAGACCAGTCATGTGGTGCATTTATCATTTCAATGTGTGACAAGACCATGATTTCAATATACTGCAATAAAGTTGCCAACTGAAAATGCATTTCAAAACGACTTGATGACATTTTGACATGTACATTTCCCAGCAGGAAAAATAAACGTATTACTCACACTACTTGAAATGAGATGTCTCTCAAACCAGCTTATTTTACAATGTCCATGAGTTGGTGGACATGCTGCAATTCTAGCTATAGTAAACGGTATGTATGTAGCGATGTACATGATGCAATATGCGAGCCCACCTGTCAAATTGAAATGTTGTTTCAGTTATTTTTGGCGAGATCTCCACAATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtg
>TU2323050
TGATTTGAGCCATGTTATCTAGACAAAAGCATTGTCAATGTAAACCATATTGTTATCTGCTGGTAAAGGGTTGCTATGTACTGCAAGTACAATCCACCATACTGTCTTTTGGTTGCTGTGGAATCGTTGTGTACCGTCCAGATGCTCACAAATATAAAACAGGAAAAGCCTGGTTATATGAAAAGGCCAGTCATTCCTCAGACAGCCATGTACTCACATGCCATGCAAGTCAAATCCACACAGAGGGAGAAATATCATTTCACAGGACATTTTATTCAGAACATCATTGAGAGAAATAAAGCTGCATTTGTAGAAACCATAGAGCCATTGAGCCGATTACCCCACACAGCAAATAGCATAGAAATTAAAGCAGAGTGCGTTTTCTCAGCTGAATCTTTTAAGTTAAAAGGCTGAAATCACTGAGAGCTCCAAAAGCATTTAAGTGCATTTTTCATTCGTAAAGCCTTCATGAAGAGTTTAGAAGTGCATAGCAGCTAAACAGGGAATTCTTCATTATGCTATTTCATTTTATCTACTCACTTTCCATCTCCTTCAAAAAGTTGACTCAAAATGAATCACACTTTCCAAACCAAACAGATATAGCATTTCAGTGTAGTTTAGCATCCTGAATTGCAGATGAAAGTTGCAAACACTTTACAACAGACAACACTAACCACTACTGTAGGCCAGAGACACAGACCAGAGGTATTACACACAATCAGATATAGTTTCATTGTTTAGATTGACACATCTGTACATGTCCACTGAAACAATGACAGATTACAGTGTTAATGTTGCTTCTATGCAGCAGCAGTGTTGTTCATTCTTTGACTGACATGAAATTGTGTTACGTGACAGAAATAATcatctctacagtacatcacaataCGACTGTACCAACCCCAATAGTCAAATACAGAATctcatttactctctctctcacacacacacacagataacagTCCACAGGCCCTGCAACAAAAACTGTCTAACGCAATGGAACCACAGAGAACCATCCAAAAATACCCCGACCTCCTTTGTTCAGTGAAAAAAAAAGATTGCTTAATACAGTAATGTTTGAGGTGATCTTTTACAAAAATATACAGTTGCTATGATACAAGTTAAAACTGTTAATAAATCTGATGGCTCTGCATTAAAAATATCACCTCACTAGGAGTCATTCAAAGTTAAATATAGATCTCTCCTCATATAGTTTCTATATGATTACTTATATTAAAGTGGTAGTTAAGGTTTAAGgaatttggcaaaaaaaaaaagcagtgcaCAAGTTGTGATCGAATCAAACGTGGATTATTTTTTACAGTCAGTAGAGTACTGCTCCCTCCTATGCAGGTCCTTCAGGGGCTAGGGAAAGTGACTAGGGGCTAGGGGAAGTGACTAGGGGCTACAGGGATAGTAGCCTGGTGCTCCAGTCCGTTTGTGCTTTAGCCAACTCCTGTGTGTTTGCGTTCATTGTCGTGACAACATGTATGGCTTGACAACAATAGAAGAGCTAGCTACAGCACATAGATGtaagatcttcatttgatcacgatgttgcaggagaactttcctgcaatgcaggaaatgtaaattgTGTAGTGTATTTGATGTTTAAAAGGGATTCTGAAGTTTGTGATTTCCACCTAAAATGTATCAAATGACTccttacaaaaatgtccattaataatAATCTACATTTCCAGTTCCTGCAGGatgattttcctgctgtagcaaactggttcaaattaagatcctacatctgtgcaGTGGGGGACCAGGCTCGGATGAGTATATTGAATCTCAAAAGAGGAAACGGAAATAATAAATCTCACCACACATGTAGTGGAGATCTTCTTTACCCCTAAGAAAAGACCTCAGCTGCTAGTCAGGAGTTTCTAAGGCCTGTTCACTTGATTGGCACAAGGTGTGGAGCGCTGCTTGGTCGGGTGCAGCGCAAGAACAGAGTAACAAGAAAGAGCCTACCGTGGCTATTGTTGGCTCGATGCAATACAGTTGTGGCGCATATCAAGTGAACAGACCTTTACGGTGTTACAGACCATCACAGGGAGAGGAGAGCCTAGAATAGGAGAACTGGGGAGACACACAGGGTGACATCTTCTGTTTGATGAAATGTCACAGACCAGTCATGTGGTGCATTTATCATTTCAATGTGTGACAAGACCATGATTTCAATATACTGCAATAAAGTTGCCAACTGAAAATGCATTTCAAAACGACTTGATGACATTTTGACATGTACATTTCCCAGCAGGAAAAATAAACGTATTACTCACACTACTTGAAATGAGATGTCTCTCAAACCAGCTTATTTTACAATGTCCATGAGTTGGTGGACATGCTGCAATTCTAGCTATAGTAAACGGTATGTATGTAGCGATGTACATGATGCAATATGCGAGCCCACCTGTCAAATTGAAATGTTGTTTCAGTTATTTTTGGCGAGATCTCCACAATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtg
>TU2323051
cgtttatatttttgtttggtatacatgACAATGGTACATGAGACAACACATTTTTATCAGAACATTCTGTTTCATTGAACAGGCCCCTGTTGCACGAGGCATCTGGCAGTTGTTGCCCCAATGACATTACTGGGCTGTATGACACCATTAACAAAATGCTAGTGCTCACGTCACTGACCTACTGGGGGATGGGAAATACTGTCAACGTAAAAAGGGGTGAGGATGCACCCCTGTAGACCCAATCAGTCAATAACCCACCGCTCGCTGCCACCAACATACCAATTCAAATCACAATTTAGATGACATTTTTATGAATATATGATTTGAGCCATGTTATCTAGACAAAAGCATTGTCAATGTAAACCATATTGTTATCTGCTGGTAAAGGGTTGCTATGTACTGCAAGTACAATCCACCATACTGTCTTTTGGTTGCTGTGGAATCGTTGTGTACCGTCCAGATGCTCACAAATATAAAACAGGAAAAGCCTGGTTATATGAAAAGGCCAGTCATTCCTCAGACAGCCATGTACTCACATGCCATGCAAGTCAAATCCACACAGAGGGAGAAATATCATTTCACAGGACATTTTATTCAGAACATCATTGAGAGAAATAAAGCTGCATTTGTAGAAACCATAGAGCCATTGAGCCGATTACCCCACACAGCAAATAGCATAGAAATTAAAGCAGAGTGCGTTTTCTCAGCTGAATCTTTTAAGTTAAAAGGCTGAAATCACTGAGAGCTCCAAAAGCATTTAAGTGCATTTTTCATTCGTAAAGCCTTCATGAAGAGTTTAGAAGTGCATAGCAGCTAAACAGGGAATTCTTCATTATGCTATTTCATTTTATCTACTCACTTTCCATCTCCTTCAAAAAGTTGACTCAAAATGAATCACACTTTCCAAACCAAACAGATATAGCATTTCAGTGTAGTTTAGCATCCTGAATTGCAGATGAAAGTTGCAAACACTTTACAACAGACAACACTAACCACTACTGTAGGCCAGAGACACAGACCAGAGGTATTACACACAATCAGATATAGTTTCATTGTTTAGATTGACACATCTGTACATGTCCACTGAAACAATGACAGATTACAGTGTTAATGTTGCTTCTATGCAGCAGCAGTGTTGTTCATTCTTTGACTGACATGAAATTGTGTTACGTGACAGAAATAATcatctctacagtacatcacaataCGACTGTACCAACCCCAATAGTCAAATACAGAATctcatttactctctctctcacacacacacacagataacagTCCACAGGCCCTGCAACAAAAACTGTCTAACGCAATGGAACCACAGAGAACCATCCAAAAATACCCCGACCTCCTTTGTTCAGTGAAAAAAAAAGATTGCTTAATACAGTAATGTTTGAGGTGATCTTTTACAAAAATATACAGTTGCTATGATACAAGTTAAAACTGTTAATAAATCTGATGGCTCTGCATTAAAAATATCACCTCACTAGGAGTCATTCAAAGTTAAATATAGATCTCTCCTCATATAGTTTCTATATGATTACTTATATTAAAGTGGTAGTTAAGGTTTAAGgaatttggcaaaaaaaaaaagcagtgcaCAAGTTGTGATCGAATCAAACGTGGATTATTTTTTACAGTCAGTAGAGTACTGCTCCCTCCTATGCAGGTCCTTCAGGGGCTAGGGAAAGTGACTAGGGGCTAGGGGAAGTGACTAGGGGCTACAGGGATAGTAGCCTGGTGCTCCAGTCCGTTTGTGCTTTAGCCAACTCCTGTGTGTTTGCGTTCATTGTCGTGACAACATGTATGGCTTGACAACAATAGAAGAGCTAGCTACAGCACATAGATGtaagatcttcatttgatcacgatgttgcaggagaactttcctgcaatgcaggaaatgtaaattgTGTAGTGTATTTGATGTTTAAAAGGGATTCTGAAGTTTGTGATTTCCACCTAAAATGTATCAAATGACTccttacaaaaatgtccattaataatAATCTACATTTCCAGTTCCTGCAGGatgattttcctgctgtagcaaactggttcaaattaagatcctacatctgtgcaGTGGGGGACCAGGCTCGGATGAGTATATTGAATCTCAAAAGAGGAAACGGAAATAATAAATCTCACCACACATGTAGTGGAGATCTTCTTTACCCCTAAGAAAAGACCTCAGCTGCTAGTCAGGAGTTTCTAAGGCCTGTTCACTTGATTGGCACAAGGTGTGGAGCGCTGCTTGGTCGGGTGCAGCGCAAGAACAGAGTAACAAGAAAGAGCCTACCGTGGCTATTGTTGGCTCGATGCAATACAGTTGTGGCGCATATCAAGTGAACAGACCTTTACGGTGTTACAGACCATCACAGGGAGAGGAGAGCCTAGAATAGGAGAACTGGGGAGACACACAGGGTGACATCTTCTGTTTGATGAAATGTCACAGACCAGTCATGTGGTGCATTTATCATTTCAATGTGTGACAAGACCATGATTTCAATATACTGCAATAAAGTTGCCAACTGAAAATGCATTTCAAAACGACTTGATGACATTTTGACATGTACATTTCCCAGCAGGAAAAATAAACGTATTACTCACACTACTTGAAATGAGATGTCTCTCAAACCAGCTTATTTTACAATGTCCATGAGTTGGTGGACATGCTGCAATTCTAGCTATAGTAAACGGTATGTATGTAGCGATGTACATGATGCAATATGCGAGCCCACCTGTCAAATTGAAATGTTGTTTCAGTTATTTTTGGCGAGATCTCCACAATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGTACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTTCAGTGGATAGAAGATGGTGCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtggatagaagatggggCACACTGAGGGCTGTtcagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2323049 False 2803 lncRNA 0.42 1 41974255 41977057
TU2323050 False 3063 lncRNA 0.42 1 41974255 41977317
TU2323051 True 3382 lncRNA 0.42 1 41974255 41977636

Neighbor

gene id symbol gene type direction distance location
LOC118936287 NA coding downstream 57724 41906824 ~ 41916531 (-)
LOC118944569 NA coding downstream 63251 41910803 ~ 41911004 (-)
LOC110506831 NA coding downstream 78960 41891935 ~ 41895295 (-)
LOC118944570 NA coding downstream 81010 41893131 ~ 41893245 (-)
LOC110506142 LOC106562525 coding downstream 111323 41827548 ~ 41862932 (-)
LOC110506839 NA coding upstream 7002 41984638 ~ 41986095 (-)
LOC110506148 LOC106587747 coding upstream 8649 41986285 ~ 42056568 (-)
LOC110506147 bend2 coding upstream 90096 42067732 ~ 42070472 (-)
LOC118944459 tubgcp4 coding upstream 140785 42118421 ~ 42138004 (-)
LOC110506841 cart coding upstream 170128 42147360 ~ 42148871 (-)
G2030945 NA non-coding downstream 52816 41903314 ~ 41921439 (-)
G2030944 NA non-coding downstream 58503 41891880 ~ 41915752 (-)
G2030942 NA non-coding downstream 69179 41890181 ~ 41905076 (-)
G2030937 NA non-coding downstream 71183 41887698 ~ 41903072 (-)
G2030831 NA non-coding downstream 107935 41866019 ~ 41866320 (-)
G2030984 NA non-coding upstream 858 41978494 ~ 41978943 (-)
G2031004 NA non-coding upstream 54146 42031782 ~ 42032359 (-)
G2031017 NA non-coding upstream 83242 42060878 ~ 42061560 (-)
G2031029 NA non-coding upstream 116997 42094633 ~ 42094991 (-)
G2031002 NA non-coding upstream 119512 42097148 ~ 42099490 (-)
LOC110515873 LOC106562546 other downstream 406342 41461857 ~ 41567947 (-)
G2030291 NA other downstream 762403 41211477 ~ 41211852 (-)
G2030156 NA other downstream 1067062 40906623 ~ 40907193 (-)
G2030162 NA other downstream 1075234 40898470 ~ 40899021 (-)
G2030157 NA other downstream 1085571 40887603 ~ 40888684 (-)
LOC118944568 LOC106562433 other upstream 238803 42214901 ~ 42217502 (-)
G2031225 NA other upstream 365646 42343282 ~ 42346725 (-)
G2031259 NA other upstream 390618 42368254 ~ 42369909 (-)
G2031286 LOC106562727 other upstream 481621 42459257 ~ 42461315 (-)

Expression


Co-expression Network