Gene
RNA
| Item | Value |
|---|---|
| gene id | G2031343 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 42557797 ~ 42558903 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2323493 | True | 1107 | TUCP | 0.49 | 1 | 42557797 | 42558903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526673 | LOC106562627 | coding | downstream | 3288 | 42551212 ~ 42554509 (-) |
| LOC110518657 | LOC106587629 | coding | downstream | 6717 | 42548349 ~ 42551080 (-) |
| LOC110526670 | NA | coding | downstream | 31332 | 42524581 ~ 42526465 (-) |
| LOC110506854 | mfap1 | coding | downstream | 41424 | 42512280 ~ 42516373 (-) |
| LOC110506162 | serinc4 | coding | downstream | 48184 | 42462581 ~ 42509613 (-) |
| LOC118944434 | NA | coding | upstream | 5346 | 42564249 ~ 42565690 (-) |
| LOC118944394 | LOC106587699 | coding | upstream | 44848 | 42603751 ~ 42608866 (-) |
| LOC110513924 | rasl12 | coding | upstream | 57847 | 42616181 ~ 42958849 (-) |
| ubap1lb | LOC106562636 | coding | upstream | 69775 | 42627022 ~ 42642253 (-) |
| LOC110526685 | LOC106562637 | coding | upstream | 84001 | 42642904 ~ 42646490 (-) |
| G2031342 | NA | non-coding | downstream | 216 | 42557352 ~ 42557581 (-) |
| G2031323 | NA | non-coding | downstream | 33709 | 42523870 ~ 42524088 (-) |
| G2031318 | NA | non-coding | downstream | 49450 | 42508116 ~ 42508347 (-) |
| G2031309 | NA | non-coding | downstream | 70163 | 42470669 ~ 42487634 (-) |
| G2031287 | NA | non-coding | downstream | 95434 | 42461976 ~ 42462363 (-) |
| G2031357 | NA | non-coding | upstream | 28698 | 42587601 ~ 42587854 (-) |
| G2031332 | NA | non-coding | upstream | 29435 | 42588338 ~ 42588647 (-) |
| G2031518 | NA | non-coding | upstream | 32370 | 42591273 ~ 42591501 (-) |
| G2031519 | NA | non-coding | upstream | 32672 | 42591575 ~ 42591865 (-) |
| G2031286 | LOC106562727 | other | downstream | 96482 | 42459257 ~ 42461315 (-) |
| G2031259 | NA | other | downstream | 187888 | 42368254 ~ 42369909 (-) |
| G2031225 | NA | other | downstream | 211072 | 42343282 ~ 42346725 (-) |
| LOC118944568 | LOC106562433 | other | downstream | 340332 | 42214901 ~ 42217502 (-) |
| LOC110506841 | cart | other | downstream | 408926 | 42147360 ~ 42148871 (-) |
| G2031974 | NA | other | upstream | 625733 | 43184636 ~ 43185724 (-) |
| LOC110506858 | LOC106562715 | other | upstream | 632795 | 43180007 ~ 43198177 (-) |
| G2032150 | NA | other | upstream | 1010257 | 43569160 ~ 43570054 (-) |
| G2032544 | tmc3 | other | upstream | 1320290 | 43879193 ~ 43881732 (-) |
