Gene
RNA
| Item | Value |
|---|---|
| gene id | G2031390 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 42685638 ~ 42687128 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2323568 | True | 1372 | TUCP | 0.43 | 2 | 42685638 | 42687128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spg21 | spg21 | coding | upstream | 4249 | 42674297 ~ 42681389 (+) |
| LOC110513925 | LOC106562633 | coding | upstream | 58607 | 42624304 ~ 42627031 (+) |
| si:cabz01068815.1 | LOC106587700 | coding | upstream | 68065 | 42609361 ~ 42617573 (+) |
| LOC118936412 | LOC106562630 | coding | upstream | 80239 | 42591623 ~ 42605399 (+) |
| LOC110526666 | prc1 | coding | upstream | 98840 | 42576377 ~ 42586798 (+) |
| LOC118944566 | LOC106587688 | coding | downstream | 43468 | 42726882 ~ 42748573 (+) |
| LOC110511523 | pcsk6 | coding | downstream | 114742 | 42801870 ~ 42886938 (+) |
| LOC110526703 | tm6sf1 | coding | downstream | 234759 | 42921887 ~ 42930481 (+) |
| LOC110515300 | LOC106583399 | coding | downstream | 397504 | 43084632 ~ 43160907 (+) |
| LOC110506077 | LOC106562716 | coding | downstream | 483550 | 43170678 ~ 43179902 (+) |
| G2031379 | NA | non-coding | upstream | 36009 | 42647769 ~ 42649629 (+) |
| G2031358 | NA | non-coding | upstream | 95247 | 42590021 ~ 42590391 (+) |
| G2031198 | NA | non-coding | upstream | 96981 | 42588359 ~ 42588657 (+) |
| G2031197 | NA | non-coding | upstream | 97791 | 42586831 ~ 42587847 (+) |
| LOC110526664 | LOC106562628 | non-coding | upstream | 109481 | 42565631 ~ 42576178 (+) |
| G2031405 | NA | non-coding | downstream | 16713 | 42703841 ~ 42708770 (+) |
| G2031417 | NA | non-coding | downstream | 37814 | 42724942 ~ 42737368 (+) |
| G2031477 | NA | non-coding | downstream | 191607 | 42878735 ~ 42880384 (+) |
| G2031381 | LOC106562638 | other | upstream | 31142 | 42651759 ~ 42654496 (+) |
| G2031110 | NA | other | upstream | 365237 | 42319310 ~ 42320401 (+) |
| LOC110526920 | scg3 | other | upstream | 963257 | 41688562 ~ 41722381 (+) |
| LOC110512697 | LOC106562529 | other | upstream | 1042654 | 41600933 ~ 41643474 (+) |
| G2032117 | NA | other | downstream | 851862 | 43538990 ~ 43539362 (+) |
| LOC110506879 | LOC106587845 | other | downstream | 1089459 | 43774037 ~ 43777549 (+) |
| G2033013 | NA | other | downstream | 1943347 | 44630475 ~ 44630763 (+) |
| LOC110516695 | LOC106562481 | other | downstream | 2275942 | 44963034 ~ 44971924 (+) |
| G2033166 | NA | other | downstream | 2285764 | 44972892 ~ 44973711 (+) |
