G2031496


Basic Information

Item Value
gene id G2031496
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 42932868 ~ 42934261 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2323718
ctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataactgcagaaaccagtccaaaagtatctctctgcctagcataaccacagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctccgcctagcataaccgcagaaaacagtccaaaagtatctctccgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccatagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccatagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctccgcctagcataaccgcagaaaccagtccaaaagtatctctgtGCCTAGCATAActgcagaaaccagtccaaaagtatctctccgcctagcataaccgcagaaaccagtccaaaagtatctctctgcctagcataaccgcagaaaccagtccaaaagtatctctctgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2323718 True 861 lncRNA 0.46 2 42932868 42934261
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110526703 tm6sf1 coding upstream 2387 42921887 ~ 42930481 (+)
LOC110511523 pcsk6 coding upstream 45930 42801870 ~ 42886938 (+)
LOC118944566 LOC106587688 coding upstream 192317 42726882 ~ 42748573 (+)
spg21 spg21 coding upstream 251479 42674297 ~ 42681389 (+)
LOC110513925 LOC106562633 coding upstream 305837 42624304 ~ 42627031 (+)
LOC110515300 LOC106583399 coding downstream 150371 43084632 ~ 43160907 (+)
LOC110506077 LOC106562716 coding downstream 236417 43170678 ~ 43179902 (+)
LOC110506863 LOC106594052 coding downstream 274997 43209258 ~ 43425863 (+)
LOC110515557 efl1 coding downstream 504999 43439260 ~ 43535306 (+)
LOC118944556 NA coding downstream 625119 43559380 ~ 43567527 (+)
G2031500 LOC106587709 non-coding upstream 5700 42926721 ~ 42927168 (+)
G2031499 LOC106587709 non-coding upstream 6752 42925445 ~ 42926116 (+)
G2031486 NA non-coding upstream 24405 42907425 ~ 42908463 (+)
G2031477 NA non-coding upstream 52484 42878735 ~ 42880384 (+)
G2031508 NA non-coding downstream 14230 42948491 ~ 42952583 (+)
G2031514 NA non-coding downstream 27516 42961777 ~ 42962021 (+)
G2031515 LOC106592271 non-coding downstream 27964 42962225 ~ 42965342 (+)
G2031516 LOC106592318 non-coding downstream 32019 42966280 ~ 42966847 (+)
G2031679 NA non-coding downstream 57026 42991287 ~ 42991676 (+)
G2031390 NA other upstream 245740 42685638 ~ 42687128 (+)
G2031381 LOC106562638 other upstream 278372 42651759 ~ 42654496 (+)
G2031110 NA other upstream 612467 42319310 ~ 42320401 (+)
LOC110526920 scg3 other upstream 1210487 41688562 ~ 41722381 (+)
G2032117 NA other downstream 604729 43538990 ~ 43539362 (+)
LOC110506879 LOC106587845 other downstream 842326 43774037 ~ 43777549 (+)
G2033013 NA other downstream 1696214 44630475 ~ 44630763 (+)
LOC110516695 LOC106562481 other downstream 2028809 44963034 ~ 44971924 (+)
G2033166 NA other downstream 2038631 44972892 ~ 44973711 (+)

Expression

G2031496 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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G2031496 Expression in each Bioproject

Bar chart with 19 bars.
G2031496 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network