Gene
RNA
| Item | Value |
|---|---|
| gene id | G2031515 |
| gene name | LOC106592271 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 42962225 ~ 42965342 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2323747 | False | 1215 | lncRNA | 0.37 | 1 | 42962225 | 42963439 |
| TU2323744 | False | 3037 | lncRNA | 0.39 | 1 | 42962306 | 42965342 |
| TU2323746 | True | 1134 | lncRNA | 0.39 | 1 | 42962306 | 42963439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110526703 | tm6sf1 | coding | upstream | 31744 | 42921887 ~ 42930481 (+) |
| LOC110511523 | pcsk6 | coding | upstream | 75287 | 42801870 ~ 42886938 (+) |
| LOC118944566 | LOC106587688 | coding | upstream | 221674 | 42726882 ~ 42748573 (+) |
| spg21 | spg21 | coding | upstream | 280836 | 42674297 ~ 42681389 (+) |
| LOC110513925 | LOC106562633 | coding | upstream | 335194 | 42624304 ~ 42627031 (+) |
| LOC110515300 | LOC106583399 | coding | downstream | 119290 | 43084632 ~ 43160907 (+) |
| LOC110506077 | LOC106562716 | coding | downstream | 205336 | 43170678 ~ 43179902 (+) |
| LOC110506863 | LOC106594052 | coding | downstream | 243916 | 43209258 ~ 43425863 (+) |
| LOC110515557 | efl1 | coding | downstream | 473918 | 43439260 ~ 43535306 (+) |
| LOC118944556 | NA | coding | downstream | 594038 | 43559380 ~ 43567527 (+) |
| G2031514 | NA | non-coding | upstream | 204 | 42961777 ~ 42962021 (+) |
| G2031508 | NA | non-coding | upstream | 9642 | 42948491 ~ 42952583 (+) |
| G2031496 | NA | non-coding | upstream | 27964 | 42932868 ~ 42934261 (+) |
| G2031500 | LOC106587709 | non-coding | upstream | 35057 | 42926721 ~ 42927168 (+) |
| G2031499 | LOC106587709 | non-coding | upstream | 36109 | 42925445 ~ 42926116 (+) |
| G2031516 | LOC106592318 | non-coding | downstream | 938 | 42966280 ~ 42966847 (+) |
| G2031679 | NA | non-coding | downstream | 25945 | 42991287 ~ 42991676 (+) |
| G2031778 | NA | non-coding | downstream | 200137 | 43165479 ~ 43165684 (+) |
| G2031781 | NA | non-coding | downstream | 204505 | 43169847 ~ 43170218 (+) |
| G2031390 | NA | other | upstream | 275097 | 42685638 ~ 42687128 (+) |
| G2031381 | LOC106562638 | other | upstream | 307729 | 42651759 ~ 42654496 (+) |
| G2031110 | NA | other | upstream | 641824 | 42319310 ~ 42320401 (+) |
| LOC110526920 | scg3 | other | upstream | 1239844 | 41688562 ~ 41722381 (+) |
| G2032117 | NA | other | downstream | 573648 | 43538990 ~ 43539362 (+) |
| LOC110506879 | LOC106587845 | other | downstream | 811245 | 43774037 ~ 43777549 (+) |
| G2033013 | NA | other | downstream | 1665133 | 44630475 ~ 44630763 (+) |
| LOC110516695 | LOC106562481 | other | downstream | 1997728 | 44963034 ~ 44971924 (+) |
| G2033166 | NA | other | downstream | 2007550 | 44972892 ~ 44973711 (+) |
